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15-2260-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 759463 [Map]; Strand: c
      • AT4G01760.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2260-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTC 
    ACCATAGCAT AGAGAAAGAG GTTGGTCTTC AATTCTATGC TTTACCACTT 
    GTGGAAAAGT GGCGCAACCA AAATCCAAGA TAAACCCACA ATTGTCTTCA 
    ATGCATCTAA GCACATGATA GCTCCTCTCG TTACAGCCAC TGCATACTTC 
    ATCATCCTCA GGTGAAATGC AATATAACGG ATGATGAGGA TGACTTGGAT 
    GGATAAATGG CTCAGAAAAT GAACCACAAA GGACATCTAA TTTTGTATCC 
    TCATGCTCGT ATCTAAAACC ATTGAAAATT TTGTGACAAG CACTACACCC 
    GAAAATATTA ACCTCGCTAG TGACTAAAGC AAGCCGTTCA TTGTGTAGCA 
    CATGCCATTT CCTTCTAGGA AATCCAGCGC AATTTTGGTG GAGGATGAAA 
    TCGCAATCCA TACAGCCATA GAAGGATTGA GGAGAGATGG GATGGTTGCA 
    TGCATTGCAC CGCTTGTTCA CCTCACACAT AAGGCCATTA ACATTGAGCC 
    TCATGTAATG CTNTTTGTGG CTGAAATGTT GTATTGNGTT GTCATCTATT 
    ACCACATATG GCTCTATATC TTCTATTTCT NCAGGNACNC CTTNAANTNC 
    CTTCCCATTC CCCACATNTT CTTCTAGTAG CACAATNTTG AATGAGCCCA 
    TATAGGNNGA AACCCCGGNT GGACGTGATC ANCCNNCAGA ANTCCAGNNC 
    ACCTTTCAGG NGGACGGGCT GNNAAATACA NNAN

AT4G01760.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 1878 Blast hits to 651 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 1845; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR