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15-2353-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9306700 [Map]; Strand: c
      • AT1G26860.1 - [+] show detail - transposable element gene
        Distance: -900; Region: promoter
    Flanking Genome Sequence: 15-2353-1 - 5-prime edge 
    CACTCAACCA TAAAATCCAC AATATTTTTA AGTCGGTGGT GTACTCGCAA 
    GAAGATATGG TGGGTCTAAC CCAACTTGAA GACTATTTAT TTAATATTGG 
    GAGTCAAACA TAATTGATCA TTGAATACGA GAAACCAAAA CATAAATGTC 
    CTATTTAATA ATTTAGTTCC ACGTATCCCA TTAATTTTTT GAGAAGAAGA 
    AGAAGAAGCA CAAATACGTC CGTTCATAAC AGATCCAAGA AAACAACAAT 
    TGACTAAACA TACATCAGTT CATATGAATC ATATAAGATC CGTAGGTCCT 
    CACTTCACTT GACTAGTTAG TTCACATGAG TTCATAGAAA CAAACTAATC 
    AAAGCCTAAA TACGTACATC AGTTTCAGAA AACCTTATTA GGGACCATTA 
    ATTTATAAAA CTTCATATAA ACAAACGTAG CCTTAATAAA CCATGTCATA 
    GAAGTTCTAA ATACGAGATA TACTAACATA TTTTGATACA TAAAGAAGGA 
    TGATCAAAAT TACAAAATTG TTCAAAGTTG ATTTTGAATA CACGTNTATG 
    ANAAAACACA AATTTCAGAA TTACCTCATT TTTTTTTTTC TTTTNGGAAA 
    NTAAANATTN CATNGCCCCG GGGNNAAGAT AAAAANNTNC NCCTTTACCN 
    NCCCNAAAAA ANATNNTGCC CNTGTTNAAC TTTNGTNNAN NCNNNNTTTT 
    NNGNCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9306777 [Map]; Strand: c
      • AT1G26860.1 - [+] show detail - transposable element gene
        Distance: -977; Region: promoter
    Flanking Genome Sequence: 15-2353-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAATTTTTCA TAAGACCCCA TTAATTCAAA ACCAAACCTG TAGGTCACCC 
    ATACCTCACT CCCTTGTAAG AAACATACTT ATCCATCAAA AGCTCATTTT 
    ATAAAATATG GATTTATGTT TACTAATTAG TATCATAAGC GATTCAAAGT 
    TCAAATTTAG ACTCAATTCA GAAAATGGGG GAAACGGTCA GAATT

AT1G26860.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01700.1); similar to hypothetical protein 27.t00122 [Brassica oleracea] (GB:ABD65056.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337)
Link
InterPro Scan - TAIR