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Mutant Lines
15-2551-1

15-2551-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 4600429 [Map]; Strand: c
- AT3G13930.1 - [+] show detail - Dihydrolipoamide acetyltransferase, long form protein
  Distance: 0; Region: exon20 (3UTR)

CATTTAAGCA AGCAAACTGT TCTAAGTCCA TGATAGTGAA CTAAGTGGCA 
TTTTATTAGA AGAAAGAGGT ATTTATTGGA GTTGATTAAT AAAATTAAGT 
AAATGGGTTT TATTTTGCCA ACCCATGATG AACAAGCATT AAGCCAAAAA 
ACAAGTGCAC AGTGAAATTG TTGGATTCCT GATTTTATTT TGAGACAAAA 
ATCTGTCAAC TCAATGATTT AAAGAATAGC AAAACACTCA ACTTTAAAGG 
CCATTGCCTA CTGCTGATCA AATCTGGTAG AATATGTTGT GGGAAAGAAA 
TTTGAGGTCA GAAGACTCTT ATGAGTTTAG CTTTTGATGT GTGTGTGCGT 
CTGAATTTTA GAGCAACATA GATTCTGGGG TCTCGATGTA GCCCTTGAAT 
GCTTTCAGCC ACTCGGCTCC AATTGCACCT GCACAGGAAG ATGACTTATT 
AGACGTTTTC GATGAGGTGA TAATTAATAA TGACAATAGG AATGAGAGGC 
GGATTCTGTA CCATCTATTA CGCCGGTGGT CACAGCTTAG TGTTACAGAC 
ATGTATGAAG CAACGTTGTA TTGGTCTGGA CCAGTACCGG GGAACAACTC 
TCTTTTCAGC TGTTTTGAGA TTCANACACC ACACTATAAT AAGTTACGCG 
GAAGAACTTC AACGGATAAA GNGGATGAGT TGCTANGGAC TACCANATCC 
AT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 4600628 [Map]; Strand: c
  - AT3G13940.1 - [+] show detail - DNA binding;DNA-directed RNA polymerases
    Distance: 0; Region: exon4 (3UTR)
Flanking Genome Sequence: 15-2551-1 - 3-prime edge
```
CCGTCAAAGA AATATCATTA AAATAGCAGC AAATATGTAA AGATAGAACA 
AAATCGTCAT CACTTTCGTG CCCTGCGCCT CCGGTTAACC TCCGGGAAAT 
TGAGAGGGGT CGGTAAGGTA GCAACCGTAG TAGAATT
```

AT3G13930.1

Model type: Protein coding
Short Description: Dihydrolipoamide acetyltransferase, long form protein
Computational Description: Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G13940.1

Model type: Protein coding
Short Description: DNA binding;DNA-directed RNA polymerases
Computational Description: DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor, A49-like (InterPro:IPR009668); Has 222 Blast hits to 222 proteins in 107 species: Archae - 0; Bacteria - 2; Metazoa - 66; Fungi - 105; Plants - 33; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link: InterPro Scan - TAIR