1. Home
  2. Mutant Lines
  3. 15-2600-1

15-2600-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 536257 [Map]; Strand: w
      • AT1G02540.1 - [+] show detail - unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae ...
        Distance: -558; Region: promoter
      • AT1G02550.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -226; Region: promoter
    Flanking Genome Sequence: 15-2600-1 - 3-prime edge 
    GTTATCGGAT ACAAAGCAGA ACTCTCGTAC CTCAAGGATG TAAAAGGAAA 
    TACTAAGGGA GAGGCCACCG GTTGGTGTAT GACGGAGTAT TGGCTAGGGA 
    GCGAGAACGA TGCAGAGTTT CAAGAAGTTG TCTTGTGTTA TCTCCGNGGG 
    CAGAAGAAAA AATTCAGAAT CGTGTCCTCA CACTCGAGTA CTAATAGGGT 
    TTTCCCATCT CTTGAAGACA TATACACTAT GGTAGATCCT CGCGATCTCA 
    AGTTCATTCC GACGGACTTG AAGTTGGTGG ATCATTATCT ACGCAACAGA 
    GTAGAAATGG ACCAAGATGG TTTCATAAAA GACATCAAAC TACGAAGACG 
    AACCGTGGCT TCTTCCGCAC GTCCACAATG ATCAGTTCAC TGAGAAGGAA 
    TGGTTCTACT TTGCCAAGAG AACAAGCGGA CCTTGTAAGA AACCTCAACG 
    TATGGTACCC GGACGAGGAG GCAGCGAAGG CGGGACTTGG ACGACCACTG 
    GCTTGAAAAA GGAGATCTTC AGTAACACCG TTGTGATAGG ATATAAACAG 
    GAAGTCTCGT ACTGCAAGCA TGTAAAAGGA CAGCCAAAGG GAGAAGCCAC 
    TGGTTGGTGT ATGACTGAGT ATTGGCTAGC GAGTGAGAAC GATGCTGAAT 
    T

AT1G02540.1

Model type
Protein coding
Computational Description
unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae - 18; Bacteria - 202; Metazoa - 802; Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes - 1751 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02550.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47340.1); Has 183 Blast hits to 176 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR