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Mutant Lines
15-2680-1

15-2680-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7413049 [Map]; Strand: w
- AT1G21160.1 - [+] show detail - eukaryotic translation initiation factor 2 (eIF-2) family protein
  Distance: -192; Region: promoter
- AT1G21170.1 - [+] show detail - Exocyst complex component SEC5
  Distance: -1; Region: promoter

CTNTGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
CCNGNCANAA CNNCGTTTCA TCCCTNCTAG CAGTGATGAT NTANATGAAG 
GATGAGCTAC CTTCAAATGG CCGTTGAAGG AGCAATCTCA GAGAGATGTT 
ACCTATCAGA AGCCTCCTTC CGCTAATTCC CGTAAGCCAG TCACCAATTT 
AGTGCAGCAG CCACTGGAGA CAAAAGAGGG CGGCAGCTCC TCCGTCTAAG 
GGAGGTGCGA AGGCGTCAAG GAAGCCATCG ATGGATGAGG ATGATGAATC 
GGAGGTGGAA TTGCTTAGCA TTTCGAGCGG GGATGAAGAT GAGGGAACTG 
ATCGGGGAAG AGGTGGTGGT GGTGACGGTG GCGGAGGTAG AGGAAGAGGT 
GGAAGTGGTA AGGAGAGAGG ACGAGCGCGG AAGGAAGATG ATAGAGCTTG 
GGATGGAGTG GAGCCAGATT GCTGGAAACG GGTTAATGAA GCTGAGGTAC 
GGTTTCTATC ATGTTTGGAT TTATCTGGCT TTAAATNGAT TTNGGANAGA 
TTATGTGTGC AATTTCGACC NTCAAATCTC AATTGCATTG TTTTGATTTG 
AAGTNGTCTT AANTAATCTT TGCTTNTTTG ATCGATNNGA ANATTTGAAT 
NTGANTCANT TGTATATGTG ATATTAGGNN GCTTGGCCTT TATNATCTCT 
CATNGAANCN ANGTGTNAAN ACCTCTCTCT AGGNCNTTCC TTNATCTTCA 
ACCCATGCNC TNCCCCAATN NTTTANNTNN GAANTNCCAN CCTTNT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7413009 [Map]; Strand: w
  - AT1G21160.1 - [+] show detail - eukaryotic translation initiation factor 2 (eIF-2) family protein
    Distance: -152; Region: promoter
  - AT1G21170.1 - [+] show detail - Exocyst complex component SEC5
    Distance: -41; Region: promoter
Flanking Genome Sequence: 15-2680-1 - 3-prime edge
```
ACTGCTAGAC ATTGTTATCT CTGACTTAGA TGATCGTCTT TGTCTTCCTC 
CCTTGAGCTA ATCGCAGAGA TCTGTGCAGT TCTTATTTGA ATTTAGTTTT 
GTGACTTTTT CCTTTGAAGA ATTTTTCTTC TGTTTTCGAC TTTTTCCAAT 
TTCCATGTAT TAATGAAATA AAAACTGGAG ACTCACAAAA CGCAGTCGTT 
TGATTATTTT AACCTAAAAG TTATAAATTC TCCTTACTCA AGCT
```

AT1G21160.1

Model type: Protein coding
Short Description: eukaryotic translation initiation factor 2 (eIF-2) family protein
Computational Description: eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76810.1); Has 90488 Blast hits to 74140 proteins in 3758 species: Archae - 1026; Bacteria - 37280; Metazoa - 18910; Fungi - 5896; Plants - 2823; Viruses - 221; Other Eukaryotes - 24332 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21170.1

Model type: Protein coding
Short Description: Exocyst complex component SEC5
Computational Description: SEC5B; BEST Arabidopsis thaliana protein match is: exocyst complex component sec5 (TAIR:AT1G76850.1); Has 822 Blast hits to 808 proteins in 207 species: Archae - 0; Bacteria - 24; Metazoa - 388; Fungi - 169; Plants - 124; Viruses - 8; Other Eukaryotes - 109 (source: NCBI BLink).
Link: InterPro Scan - TAIR