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Mutant Lines
15-2806-1

15-2806-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 4776402 [Map]; Strand: w
- AT5G14770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -705; Region: promoter
- AT5G14780.1 - [+] show detail - formate dehydrogenase
  Distance: -541; Region: promoter

TTAATAATAA TGCGATGCTA TTTCACGACA TACTTATCCA AAACATATAA 
CGTTAACAAA CAACTAAAGG GACCACTATC ATTATTGCAT TTTAGATGTT 
AGTATAAATT GAATTATTAT TATATTTGTT GGAAATTTAT GTAAATACAT 
ATGTATTTAA TATTTATCAC CTGTTAGAAA ATATGTTAAA AAAGGATTTG 
ATTTATTTTT TGTTGAAGAA GAAACATGAT TTCTAAAATA TTTGGAAATC 
TTTGATTCTG GTTTATACAC TTTGTATCAA TGGAAATTTG GTAAAATTGG 
ATTTGTCAGT GTGAAAATAT CATGGAGAGG AATCAATTAA AAAGGAAAAG 
AACCCTTCCC NNNNGAAAGN AAGGGNAAGA ATNTTNCTAA TANACATTNC 
AGGNNGNTTT TNTNAANAAG GNAAGGGGGG GNGNTATNCC NGANTTNGGN 
GNATTTNCTT ANAANTNNNN NNCCNGGGCG GNNANCANNC NNGCCCCNNN 
NGGGG

AT5G14770.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 76339 Blast hits to 14879 proteins in 308 species: Archae - 3; Bacteria - 87; Metazoa - 1237; Fungi - 1442; Plants - 70832; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14780.1

Model type: Protein coding
Short Description: formate dehydrogenase
Curator Summary: Encodes a NAD-dependent formate dehydrogenase.
Computational Description: formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink).
Link: InterPro Scan - TAIR