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Mutant Lines
15-2905-1

15-2905-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 7546491 [Map]; Strand: c
  - AT1G21530.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
    Distance: 0; Region: exon1 (CDS)
  - AT1G21530.2 - [+] show detail - AMP-dependent synthetase and ligase family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 15-2905-1 - 5-prime edge
```
ATCCTTAGTC CTTGAAGCAG TTTCATTATT CACACAACAC GAGAAACCTC 
ACCTCGTCCT CCTGGACGAT GACCAAGAGA ACGATTCTTC ATCCGCATCA 
GATTTTCTTG ACACNGTACG AAGAAATTAT GGAGAGAGGA AATTCAAGAT 
TCAAGTGGAT C
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 7546607 [Map]; Strand: c
- AT1G21530.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G21530.2 - [+] show detail - AMP-dependent synthetase and ligase family protein
  Distance: 0; Region: exon1 (CDS)

CTAAGGATAT AGAACGGTGG TCGACGAAAA CGAGTCTGGA TTCGCTGTGA 
CGCAGGAGGA CAGAGAGTGC GTGTGCGTCT AAGCGAGGGT TGATGTTGTT 
TAAGATGGCT CCGGACATTG GGACAGCAAA CTGAAGCTCA TAGACGGACN 
GGGACNGTTG GGACCCACGA CAGAGACGAC TTGGCCTTGT TTAATTCCGA 
TAGAGGAGGA AGTTAGAGCC GATGCGATAC GGAGACAGCG GTTATGTGTT 
TCGGACCAAG TATGAACGGT GTTTGCAGTG TGGAGGATGG ACGGACAGTC 
ACCATAGACG GAAGCGGCTC GGTCTAAGAA GCCGAGGACG GTGAGTGGAG 
TTGAGTTTGA TGGGTGTGGA AGTAAGAGTT CCATTAGTTA GCTGCAAGAA 
ACTATAGTAT CGTTATGATT TTGTGAACCA CTCAATGATT TTAAACTTGT 
CTTCTATGAA TT

AT1G21530.1

Model type: Protein coding
Short Description: AMP-dependent synthetase and ligase family protein
Computational Description: AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21540.1); Has 77218 Blast hits to 70321 proteins in 3603 species: Archae - 1163; Bacteria - 50491; Metazoa - 3382; Fungi - 3676; Plants - 2327; Viruses - 1; Other Eukaryotes - 16178 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21530.2

Model type: Protein coding
Short Description: AMP-dependent synthetase and ligase family protein
Computational Description: AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21540.1); Has 77153 Blast hits to 70454 proteins in 3601 species: Archae - 1159; Bacteria - 50507; Metazoa - 3344; Fungi - 3637; Plants - 2272; Viruses - 1; Other Eukaryotes - 16233 (source: NCBI BLink).
Link: InterPro Scan - TAIR