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15-3298-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8141229 [Map]; Strand: c
      • AT1G22990.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 1027; Region: intergenic
      • AT1G23000.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -2175; Region: intergenic
    Flanking Genome Sequence: 15-3298-1 - 5-prime edge
    ATTATATATG TATTGTCTAA CAAATATCTT ATCTTATCCA AAGACATCAT 
    CGTCGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8141345 [Map]; Strand: c
      • AT1G22990.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 1143; Region: intergenic
      • AT1G23000.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -2059; Region: intergenic
    Flanking Genome Sequence: 15-3298-1 - 3-prime edge
    TATATAATGG AAATTAAATA ATTCAATGTG CAATTGCTTA TCTTTGTATG 
    TGTTCATTTT TTCAAAACAA TTTTGGAGTA TAGCATGGTT TGGCGACAAC
    CAGTAAGGGG ACAAGTTTTC TTGTTAATAA ATTTTATTAA TTCTGTTCCT
    TATAATATTA CGTGGTTGGT TAATCAAATG ATACGTACGT TGAACTTTCA
    ATCTAGACTA ATAGAAGACT TCCCGAGTTG ACCGAAATAA ATAACACCTG
    CTTCTGTGAC TCTCTGAGGT TATATCTTAA ATCAAATTCG ATGTAGCATA
    TAACACGTTA TACATTAGGA ACAATTTAAT TATAGTGATG AGAAAAGGAC
    TAAATACATT ATTTTTTTGG TTGTCAACAA GAACATATGA TATAAAGCTC
    TAACAAAAAA AGAAGAACTA AATATGAAAA TATGATCAGA GGACAGGTAA
    GTACATTGTC GGGTGATGAC ATGACTAATT ATTAATTTCN ACCCCAATTT
    AAAAACATAC ATATTCTAAA ATTCTATTAT GGCATGTGAA ANTNGTGAAA
    AGACACAAAA CTAATGGACC GATGTGGAGT AACCCANAAA ACGCGTGGCG
    TANANAGGAC TTGATAATTA GGAGTCAAGG GTTGCGTTGA TGCTGTGAGG
    GNCCANGGGT TTTTGTANCN TTTTNTTCTA TTGNCANCGT NGANCGGNGT
    TTTGGGAAAT GANCGGCAAA ATNNATCAAC CTTGAAACAN CTANTNNACN
    GG

AT1G22990.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23000.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.1); Has 2286 Blast hits to 2008 proteins in 133 species: Archae - 0; Bacteria - 60; Metazoa - 111; Fungi - 41; Plants - 1285; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink).
Link
InterPro Scan - TAIR