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15-3303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2048386 [Map]; Strand: c
      • AT3G06570.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3303-1 - 5-prime edge 
    GTGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCN NNTGCAAGAG CTTTCGATCT CTTCTAGTTT 
    CACCGGAGCT TTACAAGGCC CGATCAGTCT CAGGCCACAC CGAGAGCTGT 
    CTCTATCTGT CCATAGCGTG TTATCCTGAT TATCGCATGT TCACCCTCTG 
    CCGGAAACCT GATCAAACCC TAACCACCAG TGAGGAGGAG GAGAAGAAGA 
    AATCAAATGG TTATTATTTG GCTCCAGTCC CAGATCCAGA TTCTCATCCT 
    GTCTACTTCT CGAGTCTCGT CACGGTTGGT TCTGATATCT ACAACATTGC 
    CGGTTCGCAC GCCTCCTCTA ACGTCTCGAT TCTGGATTGC CGGTCAAACA 
    CGTGGCGCGA GGCTCCGAGA TTGGGCGTGG AGCTAACCTC AGTTTCTGCT 
    AGCGTCCTTG ATCGAAAGAT ATTTGTAGTA GGAATGTACG CAGATGATGA 
    AGAATCTGAA TCCAAGAACG ACTTCTTTGA GGTGTTGGAC ACAGAAACAC 
    ACACTTGGGA TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2048433 [Map]; Strand: c
      • AT3G06570.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3303-1 - 3-prime edge 
    CTTAAGACGA GCGAGACTGT CCGATGGTAC AATCTCGGGA CGCGAGCGAC 
    GATGCTCAAT ATCAAATCAT CGGGAAGCGA CTGAAACGAG GCCGATGCCG 
    ACTGCGATTG CGGCGCCACT ATCTTCCTCT TCTTTACCGG CGGGGACAAC 
    ATTGATGACA TGCCAGAGTC TGATCAACCA CTCGTTTCTT AAACACTATA 
    TATGCCTCTA AATCAGGCCG GCTCAATAAT ATTTTGGGCC TATGCTAAAA 
    AAAAAATATT CCCTTTAAAC CTTTAAGTCC AAAAAATTTA NCTTACGNGG 
    CAGNGTTNAC TGTCTTNTTN TTTAAACGTA ATACACTTGT AGTTCTACTC 
    AACCATTTNT GCTGTAGTTT TATGTAAAAA AATAAAATTT TTTNTAAAAT 
    AGGACCCTAA AATTTAAAAA ANAAAANAAG GACCATGTGC CTTGGCNTTG 
    NTGGCNCATC CATAAAACCG NGCCTGCTNT AAAGTAACGG GGTNTNTACA 
    CGGAGTCACG GATN

AT3G06570.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G51250.1); Has 953 Blast hits to 929 proteins in 27 species: Archae - 0; Bacteria - 11; Metazoa - 4; Fungi - 0; Plants - 934; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR