1. Home
  2. Mutant Lines
  3. 15-3329-1

15-3329-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1934818 [Map]; Strand: c
      • AT3G06370.1 - [+] show detail - sodium hydrogen exchanger 4
        Distance: -745; Region: promoter
    Flanking Genome Sequence: 15-3329-1 - 5-prime edge 
    CGTTANAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCNAT NCAATGAATA ATACTGTATT ATCTAATTAT TCATATTACA 
    AAAGCTATTT CCTTGTAATG ATGAAGATGA ATAAGTACTC TTTTTACATC 
    CAATATTTTA ATCAAGACCC AAAAATTAGT ACATATAGAA AACATGACAA 
    AAAAAAAAAA AAAANCCCCC CCAAAAAAAA NNGNCCCNNN TTTTNNANNT 
    NNCCCNTNGG GNANNCCCCA AAAANNNCCC CCCGGGGGNG GGNNNCCCCN 
    GGGNCCNNNA ANNGGNNNNN NNNNCCCCCC NGGGGGGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1934797 [Map]; Strand: c
      • AT3G06370.1 - [+] show detail - sodium hydrogen exchanger 4
        Distance: -724; Region: promoter
    Flanking Genome Sequence: 15-3329-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    TATCCCGCAA GTTAAATAAC TAGTCGCCCA GATGTTTGTT TGTTCGATTT 
    TTTCTTTCAC TGTTCTTATT CTTTGCACTT ACAGAGAGGG CAAAAGCCAA 
    TTCTAGTGTA CCCATTTTGG GGGTCAACAT GATTAAGGGT TCATCATTGT 
    ACGTCTCGAT TTATCCTTTT TCATCGTGTA AATTCCTTTC ATCTTCATTA 
    TTTTGTTAGA GATGCAAAAT TTGTATTCTA AATAAGAAAT CAAAAACCAT 
    CTTGAAACAT AAAAATAGGT AGTTCAATTG TTTGAAGACC AAGAAACTTA 
    GAATT

AT3G06370.1

Model type
Protein coding
Short Description
sodium hydrogen exchanger 4
Curator Summary
member of Sodium proton exchanger family
Computational Description
sodium hydrogen exchanger 4 (NHX4); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: response to salt stress, sodium ion transport; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 5892 Blast hits to 5885 proteins in 1663 species: Archae - 61; Bacteria - 4002; Metazoa - 840; Fungi - 131; Plants - 419; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR