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15-3459-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2759520 [Map]; Strand: c
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3459-1 - 5-prime edge 
    CGTTATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCG ATACCAAACT CGACAGCAAC AACTGTCTCG 
    TTCTTTGCAT ATTGTGATAA AAAACCTAAA GCAGAGGAAC TGTTGTCCTT 
    CTTACCAAAC AGACTAAGAT CCAAACTAGA TGGAACCATT ACAAAAGCCA 
    AGACATCATC ACCAATCTCG TTGGACATGG AAGAAAACGA GAAGTGAGTA 
    GAGAAAGATC TCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2759519 [Map]; Strand: c
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3459-1 - 3-prime edge 
    ATTANAACNG NAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAAGACTCCA GGACAGGAAA CAGTGCAAGA ATTTTAGTTG GTAGACCTGA 
    ATCTGCTGAA ATTAGAAACC TTTCGTTTGT GGGTGACTTG ATGATGGACA 
    ATGGAAGGAC TCTGAGCTGT ATGATTGAGT ATGAGGCAAG TTCTAAGAGA 
    ATGATGGTTC GATTCAGAAA ATCTGGTTCG GTAAAGCTGT TTGATCCGTT 
    CTTCTCTTTC TCGGTAGACT TGGCCAAGTT ATGGAAAGGT GGTGAAGTCA 
    CTGTGGGTTT AAGCTCTGCC AATGGGAACT CTTCTTCCAA GGCACATTTT 
    CTCCATTCAT GGAGATTTGA AATAAGACAT CCTCCTCCGA TGTGGATGCA 
    TTCAGTGCCG CTTGAACCGA ATGAAGTTTC AAAGGAGGAG GAAAATGGTC 
    GAGGGAGAAG TGAGTGTACG CGGAAAATGC TTGGTGCTTT GATCTTTGGT 
    GCAGCTTGTG GAGCCTTAGG GGCACTGCTG GGTTTGTATC TCTGGACGAT 
    ATGCCGTGTT AGGCGGTCNA TGGCCGTGGT TCCAGAGGAA TGTGCTATTG 
    AACAAGGCAA GANGTANTGA GTAGTTTGGT TTTGGTGTTG AAAAGTTGTC 
    TTGTGTTGTG GTGTAAATTT AGGAACTTTC TCTTCTTCTT CTTCCCTCTT 
    GTTTACTTGA TCGTTCTTTA GTGATTCTTA TGTCCTGTTA CTTAGTTGCA 
    GGTTTGGGNA AATGACTTTT NCAAGTAAAA NCTAAACNGG GANAAAANGT 
    TAGCN

AT3G09035.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin family protein
Computational Description
Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 816 Blast hits to 814 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 813; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR