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15-3495-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26969388 [Map]; Strand: c
      • AT5G67630.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3495-1 - 5-prime edge 
    CTTNTATAAA CTAACAAAAT CGGTTATNCG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC TTGTTAGCTT TTNTCTAAAC CCTAAAACCT 
    TAACTTTTTG CTCTTCTCCC TCCGCCTCAA TCGCACGAAG ACGATAATCG 
    AATATGGCGG AACTAAAGCT ATCAGAGAGT CGGGACTTAA CCAGAGTCGA 
    GCGAATCGGC GCACACTCAC ACATCAGAGG ACTAGGTCTC GACTCTGCCC 
    TCGAGCCGCG AGCTGTTTCC GAAGGTATGG TCGGTCAAGT GAAGGCGCGT 
    AAAGCCGCCG GTGTAATCCT TCAGATGATT AGAGAAGGGA AAATCGCGGG 
    TCGGGCTATT CTAATAGCGG GTCAACCCGG AACGGGTAAG ACAGCGATTG 
    CAATGGGTAT GGCGAAATCT CTTGGCTTGG AAACTCCTTT TGCGATGATT 
    GCAGGAAGTG AAATTTTCTC ATTAGAGATG TCAAAGACAG AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26969386 [Map]; Strand: c
      • AT5G67630.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3495-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    AACACAATGG CAATGACGAT GTAAGAGTTA AATCCTCTTA ACAAGGGCAT 
    AAAAGGAACT CACAAATCTT ATAGACGAGA ATTATAAATT TAGTAATATA 
    CCCTTGAATT ATTAAAGATG AAGTAATTAA CTCTTAGATA AAGGTCTGTG 
    ATAATTTGAA CCCTAATTAG GAATTTCAGG GATTGCATTG GATC

AT5G67630.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR