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15-3579-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7126245 [Map]; Strand: w
      • AT1G20570.1 - [+] show detail - Spc97 / Spc98 family of spindle pole body (SBP) component
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3579-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    CATTTGTCTC AGTCAAGCCT TCATGTCCTT CTCGCTGGAT TTTTGTATGC 
    TGCTACATGT TTGAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7126249 [Map]; Strand: w
      • AT1G20570.1 - [+] show detail - Spc97 / Spc98 family of spindle pole body (SBP) component
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3579-1 - 5-prime edge 
    NTAAAAACTA AACAAAATCG GTTATACTGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TCAAACTCGT ATCTCACTTT TAGCGCGGAA 
    AGTTTGTTCC TTTCGTTCCC AGAAAATGAA GGGACTAGAG AAACCTTGCA 
    AAGCT

AT1G20570.1

Model type
Protein coding
Short Description
Spc97 / Spc98 family of spindle pole body (SBP) component
Computational Description
Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: transferase activity, transferring glycosyl groups, tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80260.1); Has 1016 Blast hits to 914 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 582; Fungi - 173; Plants - 165; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR