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15-3699-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3181059 [Map]; Strand: c
      • AT3G10280.1 - [+] show detail - 3-ketoacyl-CoA synthase 14
        Distance: 0; Region: exon2 (CDS)
      • AT3G10282.1 - [+] show detail
        Distance: -911; Region: promoter
    Flanking Genome Sequence: 15-3699-1 - 5-prime edge 
    CNNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT ATCTTCTTTT TGTTCAGCAC AAGTGTAGTG 
    TTTATCGCTA GAGCCTTTGT GAGTCCTTAC AATATGAGTC AATTCGTACT 
    TAGACCGGAC TCGGGCTTGA CTCCGGTTTG AGAGCATAAC CGCAGCGCCA 
    CCTACTCGGA ATAGACAGTT AGGGACTAAC ATTGACCGGT CGTTGCCTCG 
    ATACATGCTT AGAGTCATGT TCTCCGTACT AACAATAACT GCGTAGGTAT 
    TAGGGTTTGC CTTTAGTAGA TTTGTGGCGA GGTCCACAGA GATTCCTAAA 
    GAAAGTATCA AGAAGCTATG AAGAGTGGTA AACTCTAAAA GGAAAGATAG 
    AAACTGGGGA GTTGGCTGAT AAAGATGGAC AGTAACGATT GCGTAATATA 
    AATTTATCGG CCTCGTCAAG CCCCGGCGCT GCATCCCATA CCGGAGAGAT 
    TGTAAGTTTT GACGTCGGTT TTAAGCT

AT3G10280.1

Model type
Protein coding
Short Description
3-ketoacyl-CoA synthase 14
Curator Summary
Encodes KCS14, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Computational Description
3-ketoacyl-CoA synthase 14 (KCS14); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: fatty acid elongation, very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: rosette leaf, fruit, cauline leaf, flower; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 13 (TAIR:AT2G46720.1); Has 1989 Blast hits to 1976 proteins in 413 species: Archae - 0; Bacteria - 666; Metazoa - 0; Fungi - 0; Plants - 1240; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10282.1

Model type
Pseudogene
Curator Summary
unknown pseudogene
Link
InterPro Scan - TAIR