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15-3871-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5537523 [Map]; Strand: c
      • AT2G13350.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3871-1 - 3-prime edge 
    NTTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCA 
    TTCGTAGAGT GCTTCCTCAT CTAGACGAAA CACAAACTTG TCGTTCCATG 
    TAGGGCTTGT TCCGCCCGTA TTGTCGACCC GAGTCGTCAA TTTACGCTCT 
    GGATCAATCC AAGCGATTGC ATATGTCTTC ATACACCGTG CCACNGGGCG 
    CCAATTCTTG GGCCGAAATA ATATTCAGCT CCAAAATTTG ACAAGGCGCA 
    AGAAAAGACA TTTTGTGTTT TCTTGACAAA ACTAAATCTG AAAAAGTTAA 
    ATAAATGGAG AGGATGAAAT TTGGATTTTC AGTAGACAGA AAGACAGATC 
    CGTCGTCGTC CCCTCCAAGG ACGACGAAGG AAAGCAATGC ATGAAGATGA 
    AAATGGAAAA GCAAATTGAC AAAGACACCC AAAAATAATA ATAAGCAAAA 
    AAAGAATTGT TTTTTTTGTT TATTAATTTC TTGTTTTGGT TTTTGTTATT 
    TTAGAACACC GAATCAATTG CATTACTTTC CGTTGACTAC TATTTTCTTT 
    CATTGATCTT CTTTCGATAT TTTTAGATCT CTCTACTCTC TTTCACTATT 
    TTAGGTTAGT TTCTGTTATT TTTCTGTATA ATTCCAGAGT TTATAGAGAT 
    TGACTTATGG AAGTTCTGTT TAGTTCTATG TGCGTTCTAA GAAAGTAAAA 
    GATTGCAAGT CCAAAAAACA AAATAAAAAT AACAAAACTT ACGAGTTCAA 
    ATTGATAGTT AGAATT

AT2G13350.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 331 Blast hits to 320 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR