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15-3885-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7605721 [Map]; Strand: w
      • AT1G21660.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3885-1 - 5-prime edge 
    GACCCACCCA CCCATTCATT TCTGTGGCTA CTCTATCGTC GTCGTCTCCA 
    CACCGTCGGT GCCCTCACGG ATCAATTTCT AGAGAGAGAG AGAGAGAGAG 
    AGAGAGACNA TTCNTTTTTA TANATTCTCG ANANATTTTT NNGCCTNCTT 
    NNATCTCTNN TTTTTNNNTA TACANNATNC CCNNATTTTN NCACGCNAGA 
    TCCGNGATTT TNCNGGGATN GATNTGAGGG GGGGANNGAG AAATNCGTGT 
    GTGTTTTGNG CTCGANAANC CNGANAANNG GACGAGTNNG GTGTTNTNAN 
    NGNGCGTTGN GGGATNAACC CACAGGGTAT ATNTGCTCNG NNGGNTGNTT 
    NTAAGCGTNN CCCTAACAAC NGNGCNCAGA GCNGGNATTT GGGNNCNCGC 
    TNCTGTGGTA NAANNGCAAA GTNCACGTNT TTTTNTNNCA ATANCTCNGG 
    NAATAGNGAT TCNACTAGNG GGTCTNTGTG AGAGGGANAN TATATTTTNT 
    TTNNGGCTNT CTNTNCTAAT NNGAGGGTTT ANAANGATTT NGNTGTTTGC 
    GGTGGGGAAA ACAAATCTTT ATCTTNNGGA GANAATAGNA AGTCGTNANA 
    GAAAAAAGAT TTGNTCTTCT NCAATTGGGG GAANNNGGAG AAACACANCT 
    CNTTCTNNAG GAGANGACNN GNGGGGGGGT GTTNTCCGNG GGTANAANNG 
    CTGTGANNGT GNAAAAANNG NANATTTTTT TTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7605605 [Map]; Strand: w
      • AT1G21660.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
        Distance: -94; Region: promoter
    Flanking Genome Sequence: 15-3885-1 - 3-prime edge 
    GGTGGGTCAG AGAGACAGGT GTCTTTCCCT TTTAAAATTC CCACCTTCCT 
    TTTTTTTCTT CCTTTATATA ATCCTTCGTA ATTATTTTAT TTTATTGACA 
    AAATATTCCA TTACACTAAT TAATAAACTA ATTCGTTTTA ATTATGGAAG 
    TCATTTTTAG GATTATAAGC CCAGTTTGGA TATTATTAGT ATCTTGTAGG 
    ATTTTATTAC TTTATTTGCA ACGTTGAGAC AATCAATAGT TCCAAGAGAA 
    ATGTTACACA ACTTTATAAC ATAAAAGCAA ATTTTCTTAC ATGTCGATGC 
    ATTTGAGAAG TTGGTTTTTG GGCGTAGATA GAAAGCAAAT AATTGCTCAA 
    TTTGAATGAA CATGATTACT ACTACAATAA AAAAAAATAA TAATAATAAT 
    AAGTTCTCTC TATGATTGAA CAAACAATGT CGATTTATTT AACATATGTT 
    ATTGAAAANA AGTAANACGG CTGCTTCCTG GAACAATACT CGTCGAGTTC 
    CAACAATCAA GCCACCTNTA GTTTTCATTT TTTTACAAAT ACNAATGAAT 
    CTGGANAACA TAGCTGCTAC ATTGAGTGGA TCTCGAGCTG TTACATTGAG 
    TGAATCTCTA GGACATAGCT TCTACATTGA GACAAACTTA TCACATTCAT 
    CAATAAACTT ATGGAACTCC AGTATTAAGT TATAAAAATA TGCTTAAACT 
    TTCAGTTGAC AGNGAGTGTC CANCCCCGAC CCCACCATAA TTTTGTGTTT 
    A

AT1G21660.1

Model type
Protein coding
Short Description
Chaperone DnaJ-domain superfamily protein
Computational Description
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink).
Link
InterPro Scan - TAIR