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15-3960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14973604 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 15-3960-1 - 3-prime edge 
    ATTAAGATAA TCGAACAAAC CTGTATACTG TTAATTAGCT CCTGAGGATG 
    CTCAATACGC AAACCAACCT GATCCACACA AATCGATATG AAATCAAATG 
    ATAATACCAA GCCAGGGAAG ATAAAAGTAT CCAAATATAT TGATTCAAAA 
    TGGATATTTT ATAAAACAAC ACACTCAAGA AATATGTACA AGGAACTTAC 
    AGCAAAATCT TTTGGAATCA ATTCGACATT ACGAGAATGA AGCATCTCAT 
    ATGTGTCACG TGCTGAATGA CCAACTGCAA GAACAACTGC ATCAACCTTT 
    AAATTCTGGG AGGTAGTCTG CAATTGGTTT GTTGAATCCG AAACCCTGAC 
    TCCAACAACA CGAGAATCCT CTACCAGAAG ATCATCTACC CGAGTTCCAA 
    ACTTGATAGT CACCTAATTA AGTATATGGA AATGGAATCA AAGAGAATGC 
    TCAGAGGAGA AGAAAANAAA AAAAANNGCT TNNANNNGTT CGTGNNNGAA 
    NNNTANNTTA NTNTGTTCNT TTAAAAANNT NNCCCCGCCN TTTGAAAAAN 
    TGNNNCNGNN TNTCCCGGNN TAGGGGNANN NCNGNNTTTG GNCCNCNAAA 
    GNGNNTNTNN NTTNNTAANT TTTTTNCGGG AGACCCCCAA CNGNANCCNC 
    CGGTTTTTCN CNCCNTGTNN CNANTTANAA NGCGGNGGNG CCNNTTTTTT 
    NTTTTTNGCC CCNAAACNGN GGGGTCTTNG ATNTANACNC NTNNNCCGNN 
    NAAA

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR