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15-3999-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4361167 [Map]; Strand: c
      • AT1G12790.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 B...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3999-1 - 5-prime edge
    TCTAGGAGGT TCGTCAATGG CGACGGCGGG ATCAAGCTAC AGTGTCTCAA 
    CAGATCATCA AGTTTCGTCA CCTCTCGTGA ATCTAGGTAA CCACTCTTCT
    CTGTTATCAA AATATCCGAT CTACTCAATC GTTAGAGTCT AGGATTTGCA
    AAATTTTGGT GTCGATTTTA TAGCTGTGAT TCAAATCAAA TCTAGGAAAC
    TTGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4361283 [Map]; Strand: c
      • AT1G12790.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 B...
        Distance: -11; Region: promoter
    Flanking Genome Sequence: 15-3999-1 - 3-prime edge
    CTCCTAGAGT TATAGAAATT CGAAAATCTT GGCGGATGAG GATGACGAAT 
    AATTATCAAA TTTGAATAAT TAATTGTTTT CGTCCCACAT CGCTCTCCGA
    CTTTGGTTCT CCTAACCGGT TCATGAGTAT ATATAAACCG GTTTTGAATT

AT1G12790.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR