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15-4018-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7253106 [Map]; Strand: c
      • AT2G16710.3 - [+] show detail - Iron-sulphur cluster biosynthesis family protein
        Distance: 2817; Region: intergenic
      • AT2G16720.1 - [+] show detail - myb domain protein 7
        Distance: 2423; Region: intergenic
    Flanking Genome Sequence: 15-4018-1 - 5-prime edge
    CAACTATTCG TAGCTTTTAT AGAACCTGGA GAAATCTATG ATCATTGGTT 
    TCATGGTGAA TTTGTAACCA CAAACAAAAT GGATTGTGAC ATAAGGGAGT
    TACAATATAA ACNTTGTAAG GATTAGGGCA TTTCAAGGTG CTAGTGGCTC
    ATTTGATCAT GATAAGACAA ATTATTGGGA TGTTAGAGAA GATGGAATTT
    ACTTTACACA CGGTAAAGAC GTACCAAAAT TAGAGTATCC ATGGTAACGT
    GTTCTTAAAA GTGGGCACAT TAACCTTTTG TTACTGGAGA ATATAGTGCA
    AAGTCTGGAT ATCAAGCAGC ATCTATGGAG GTATCTACTG CTAATACTCC
    TACTCAAACT ATTCATAATG TTTTTCACCA AATGCTCACC AAAAATAAAG
    TTCTTCCTCT GGAAATTGAT GAAGAATGCT CTCCCAGTTG GTGAAAATCT
    CAAAACCAGA GGTATCAATC AGACGGCTGC TTGCCCCCAT TGTAATGAAA
    GTGAAACCGG TCTGCATCTC TTCTTCCACT GCACTTTTGC TAAGCAAGTA
    TGGGATCAGG CACCTTTCAA ATATCCTTTC CAAGCATCTC AAGTTTCCAG
    CTTGCAATTG GGAATTGAAT CTTCTANAAA GCTAACGAAT TTGCCACCCA
    CGGGTCTCGG AAATGGTCCA CTCTTACCTT GGATN
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7253222 [Map]; Strand: c
      • AT2G16710.3 - [+] show detail - Iron-sulphur cluster biosynthesis family protein
        Distance: 2933; Region: intergenic
      • AT2G16720.1 - [+] show detail - myb domain protein 7
        Distance: 2307; Region: intergenic
    Flanking Genome Sequence: 15-4018-1 - 3-prime edge
    AATAGTTGTT TGTTGTTCAA TTTACAAAAG ACATTGACTT GCTTTCCCTC 
    AACAGAATT

AT2G16710.3

Model type
Protein coding
Short Description
Iron-sulphur cluster biosynthesis family protein
Computational Description
Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1).
Link
InterPro Scan - TAIR

AT2G16720.1

Model type
Protein coding
Short Description
myb domain protein 7
Curator Summary
Encodes a member of MYB3R- and R2R3- type MYB- encoding genes
Computational Description
myb domain protein 7 (MYB7); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9129 Blast hits to 8417 proteins in 488 species: Archae - 0; Bacteria - 0; Metazoa - 770; Fungi - 477; Plants - 6097; Viruses - 3; Other Eukaryotes - 1782 (source: NCBI BLink).
Link
InterPro Scan - TAIR