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15-4178-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12096350 [Map]; Strand: c
      • AT1G33360.1 - [+] show detail - ATP-dependent Clp protease
        Distance: 325; Region: intergenic
      • AT1G33370.1 - [+] show detail - pre-tRNA
        Distance: 929; Region: intergenic
    Flanking Genome Sequence: 15-4178-1 - 3-prime edge 
    GCTTGCAGCT ACTAACTATG CTTTGCTCGT TGAACAGTTG AACTCATCTT 
    TTTTATTAGA AACAAAAGCA GAGAAACTAT TTGCTTTTTG TTTTGTTTTG 
    TATAGATTAT GAATTTGTGT TTGTGAAAAA TGTTGATGAA GAAGAGATGA 
    GACTCTGATG AGTCTTGTTA TATAATAAGA GAAAGTAGCC GCTAGTTAAA 
    GTCTAAAACC AGATCCTTTC TCCCACTAGT TTTTCCCAGG TTTCTATTGT 
    CTTGGTGGTG AAATTACCAT TATGTCCACA TGAGAACAAA CTGAATTAGG 
    GCCACTATCG GCTTTACGGA AACTATGTGT GTTCATGCGC TACTGGTTTC 
    CGTGATTGTT TTTGAGTTTG ACGAGTTTTG TGGAATTTTG ATATCTATAT 
    AACATATTTC AAATACAAAT TTTCTAATTC TAATAGGTTC GGGTTTAAAA 
    AAAAAATCGG ATCGGTTNTA ATTTAATTTT AATCCNAAAT TNTTCAGTCG 
    GATNTTTCGT TAAATTTAAT CAAAATTCAT AACGAACTTA ATTTTTAAAT 
    CTAAAAATAT ATTTTTTCTT AACTAATTAC TATATCTATT TTTTTTTATG 
    GGATATTCCT TACAAATNTT ATAGTTAAGG AAATGAAATT GGATTATTNA 
    ANGTNAATAT AACAAATTTG AAATAATNTC CTAANACCTA CCTCTNTTTN 
    TANTTTAAAT TAAAAAATTT GATTCCCTTT CNTTTTTATT TA

AT1G33360.1

Model type
Protein coding
Short Description
ATP-dependent Clp protease
Curator Summary
Encodes ClpX3, a subunit of the Clp protease complex.
Computational Description
ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G33370.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: ACC)
Link
InterPro Scan - TAIR