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15-4182-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8378006 [Map]; Strand: c
      • AT1G23680.1 - [+] show detail - Domain of unknown function (DUF220)
        Distance: -850; Region: promoter
      • AT1G23690.1 - [+] show detail - Domain of unknown function DUF220
        Distance: 0; Region: intron3 (CDS)
      • AT1G23690.2 - [+] show detail - Domain of unknown function DUF220
        Distance: 0; Region: intron3 (CDS)
      • AT1G23690.3 - [+] show detail - Domain of unknown function DUF220
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-4182-1 - 3-prime edge 
    ATCAAAACCT TTCTTGATTT GTTTTCCTAA TTCATCAGAA AAAAATATCA 
    CACTCTCAAA TATTTCTGTC ATTAATACCA CATTTGAATC ATAAAAATGT 
    AAAGAGAAAA ACCAAAAGTT GGCGCCCAGT CTCGTTGTCG ATCCTGAAGA 
    ATGGAAAGTC GTTCGGATTA GCGAACAAAT CATAGACCCC TTCCGGAGGC 
    AATCCTACTG TCAACTCTAT GTGCATGTGG CAAAGACCCT TTTTTGTTGT 
    CACCTTCAAA CATGAAAATA TAAGAAATCT TTCATATTTT TTTTTTCTNA 
    ATNCTTCNNC CAATNCCTTT NAAAAAAATA AATTNTTAAG TNTTACCTTG 
    NCCTTAGGNG GANCNTCNTN CCANGGTTTN TTNTTNTTTG CAGNTNTCCA 
    AAGTTTTCCT NGNTTNTTAC CCTNANNTTN GNCATAANAA AANGCCCGTT 
    NNTNAGTATN ATTCTNNGNC NCTGAATNAA AGNCANCNTT NTNAAATNTT 
    TNGGACTCNT CCTNCANCAC CAANCTTANC CNTAATNTNT TTNTTATTAT 
    CATTCTCAGC TTCTATNTTT NTTTAACCAA TAATATNTTT NATTTTTTGA 
    CATCAAATGA AATTTACCTT AAAAGGCTGT TGTTGNAGGT TCTGGTTGAT 
    CCACCCAACA AATNTTNNAA TACNCTCNTT TNTNTTGAAA ATTNANNCCN 
    AACAATATTN CCTGNNGAAN GAGGGAAAAN NGCCATTT

AT1G23680.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF220)
Computational Description
Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23600.2); Has 82 Blast hits to 71 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23690.1

Model type
Protein coding
Short Description
Domain of unknown function DUF220
Computational Description
Domain of unknown function DUF220; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23600.1); Has 139 Blast hits to 124 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23690.2

Model type
Protein coding
Short Description
Domain of unknown function DUF220
Computational Description
Domain of unknown function DUF220; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23600.1); Has 139 Blast hits to 124 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23690.3

Model type
Protein coding
Short Description
Domain of unknown function DUF220
Computational Description
Domain of unknown function DUF220; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23600.1).
Link
InterPro Scan - TAIR