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15-4206-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8349422 [Map]; Strand: w
      • AT1G23540.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4206-1 - 5-prime edge 
    GTGGGTCCTA CNTTCNGCAN ACNGGCGACG ATGGAGGAGG CGATTGAAGA 
    TCTTGANACG GAGGAGGGNT GTTGTCATTG GATTCATTTG GTGAAGCTGG 
    TGGTGTTTCG GAATCCTCTG GAGGAGAAGG AGATTCGTTT GACGTCGGTG 
    GCGGCGGAGA AGGGGTTGAA TCAACCGGTG GAGAAGGATC GGAAGGTGGA 
    GGTGGAGAAT CTGTTAGCGG AGGAAGAATC GAAGGTAAAG GAGGAAGCTG 
    TGAATCTGGA GGAGGAGTTG ATGGTTCTGA CAGCGGCGGT GTTGATGATG 
    AATCAGCTGG TGGACTAGGA GGAGAGGAAT CAACAGGTGG AAGAGCTGAG 
    TTTTCGGATG GAGTCTCTGG TGGAGGAGCG GTATCAGCTG GTGGTGCTGG 
    TGGTGAAGAA CTCGGCGACT CGCCTAAGTC TGACATTTTT TTTTTNTAAG 
    GAAAAANCTA NCTTANTTTA ATTNAATTTA ANGANGGATT TTTTNTAAGG 
    CAAAANCTAG GGTTTNTAAA ATTCCCAGGA CCTTGAAAAA CANGGGGGAN 
    ANAGAGGAAA AAATGTCCAN ACTTTANTTT CTAAAGGTNT TTTTTNTNTC 
    CCTCAAACTT TCCTTTTCCC NGGAAAAANT AAANTAAAAN CNANTNTAAC 
    AAAAAANCCC CCTGANCNTN NNTGATGATN ANGATATNNN NCNNGGGCCC 
    NTNNTNNNCN NNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8349347 [Map]; Strand: w
      • AT1G23540.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4206-1 - 3-prime edge 
    TTAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCAAA 
    CCCGGAATCA CCACCGTTAC AATCTCCTCC AGCTCCACCA GCATCAGATC 
    CTACAAATTC ACCGCCAGCT TCACCATTAG ACCCTACCAA TCCTCCCCCA 
    ATACAACCAT CAGG

AT1G23540.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a member of the PERK family of putative receptor kinases. Overexpression leads to morphological defects and reduced fertility and increased expression of MAX genes.
Computational Description
INFLORESCENCE GROWTH INHIBITOR 1 (IGI1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: developmental process; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, anther, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: root hair specific 10 (TAIR:AT1G70460.1); Has 385447 Blast hits to 227080 proteins in 6289 species: Archae - 678; Bacteria - 66210; Metazoa - 145576; Fungi - 56663; Plants - 56890; Viruses - 7200; Other Eukaryotes - 52230 (source: NCBI BLink).
Link
InterPro Scan - TAIR