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15-4257-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7655800 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 15-4257-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TACGATCTGA 
    AAGCTATTAG AACTTAGTAG CAAAGCCTCA GATATAAACA AGAGATGAGT 
    GGGTAGTATT CATACAACAA CAAACCATAG ATTCGGTAAT GGATTGCCTC 
    TAAATTAGCT ATTATTCTCC ATGGTCGTGA AGGTTGCCGT TCTCTTGGTT 
    TCTTCTGTGG CTTCTCTCTC TTCTGAAAGC ATGAAACAGA TCCAACCCGA 
    GGCCAACATT AAGAATGTTC ATTCCTGCCA TACCAGACAG AGCGAGTGGT 
    AACTCCACGC CTTTCCCAAA CTTGTGTGCG TCTTTGATCA GCTTGATAGT 
    GATGAGAATG TGAGGAATGC ATCTCGCAAA CACAAAGGCT GTCCAGTTTA 
    ATACCCACTC CAGTTTCACC AATGCTGTGT TGCTGTCTCG GATTCCTGCC 
    ATTCTCCTTA GCTTCCTCAC GTGTAGAAAG ATCGAATGCA TCTGTTTACA 
    CATCCGAATA ACAGAGGTGT CACTTTTGTT CGAACAAGTA GATGTTGTAG 
    AGTTGAGTCT ATATCTAACT AGATTGTTAT ATATGAAACT AGCGCTAGTT 
    TAACTAGAGA NTGTTAGCAT AGATTCGGTA AAGAACAGAG AAAAGCCAGG 
    GCAAGTTTTC AGGGAAGAAA AAAGTGGAAC GTACCTCCAC AGATGAGAGT 
    AAGAATAGGN ANTTGATGGG NACATNTCNG TATANCGGCC ATGTGAANCA 
    AACANGGNGG ACTANATNNT GAACANNANT ANAAGGNNTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7655796 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 15-4257-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAT AATAGAGAGA TACATACAAA TAGAGACTCT 
    ATAGGAAAAC TACATGTAAA TGTTATTTCT TGATGATTAC AGTCAACAGA 
    CTTTTTTTCT TCTTGTGTTT GGGGAAACGG AACCAAATTA GAATTTTGGT 
    TTGATCTTTG GTTGTGATTT ATATATCATA ATCATTATAT AAAAGTTAAT 
    CTTAATGAAC TTTGGTTTAT TCAGTTAAAT TTTGGTATAA TCTTTTCAAT 
    CTATTAGGAA AGTTTGTTTA GTGTTGAGTT GATGAAGTTT GGTCCGGTTC 
    AGTTTCCACC AATGTTTGGA AGAAAAAAAA ATGCAAGAGC ATGANAGGTC 
    CTACCGGGAG TCGAACCCAG GTCGCTGGAT TCAAAGTCCA NAGNGCTAAC 
    CACTACACCA TAGAACCTCA GGNGCTTGTT CTGTTGCATG TNCCAGTTTA 
    NAATCTAATC CAAAATATTG TNTTTTANAC ACGACCAATG AATAGATTCA 
    ACATCAGCAG TTCAGCAGCA CCACANATTG CAGTTTTCTT TGTCTTTATC 
    TANCCAAACA AAACAAAAAT CAATATTTTA CTTGGNGACA ANGCATCATA 
    TGAGACCATC AACTGGTGAC AGGGAAAATA ACAAAGATGA ATCTCNCAAG 
    ACATAAACGT TAANAAGATT CNCCTNTGTA NCAAAAGAAC ANGGGTGATC 
    TTTTTGCTAC TAACAGNTNA AATCTGAAAT TTGGNA

AT1G21790.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR