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15-4274-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19268229 [Map]; Strand: w
      • AT2G46890.1 - [+] show detail - Protein of unknown function (DUF1295)
        Distance: -59; Region: promoter
    Flanking Genome Sequence: 15-4274-1 - 5-prime edge 
    GTTGGGTTGG CCTGTAGGAA GGAGAAAGAG AATGCAATTT ATAAACTGAG 
    CTTAAAGAAT ATCTTTGGAC TTTTGGGTTG GGTTCTTTGT GGCGTGTATG 
    GGCCCATGTT GGCCCACTTT GATCACNTGA TATGATTAGA GTCTTCTGTT 
    TAATTATACT TTNGGTGAAA ATTAAAATNT GAGNCAACTG TAGATAAAGA 
    TATTAGCNTT TTTGTAAAAG AGCCGAAAAA GTCAGTAATG AAGAAAATAA 
    TTGGACTATG ATTTTGTATC GTAATGATTA TGGTATGAGA TTTCTGACTA 
    TTAAGTAATG AAAGTAATAG TGTAAAATAT ATACATTAAA CAATATAAAC 
    TCAAAAATTA TGAAATGTAA GTGGTTAAGC AGAAATAGGG ACAAATGATT 
    AACAAATTTC AGAGCATGGG GAAAGGGAAT CGCAATAATA ATAACTAGGA 
    TTTAATCCGC GGTAAACCGC GGACAATCGG TTTATTTGGT TTTTATACTA 
    AATATTTGAA TAAATTTGAT ATCTTAAATT TATAAATATA AATTTTTTAA 
    TCAAACATAA CTAAATAATA ATTGGGATTT TTTTTTGGTT GTTATTNAGN 
    GATAAGANAA ATGTGTTAAA ATGTGTTTNA AAATGNGTTG TAATTTNAGN 
    GAAAGTAAAA TATTTACCAA AAATGTTAAA TCCNCAAATT GGGTNTAANA 
    TTTTTATGAA TATAANGGGT TTTTTTAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19268113 [Map]; Strand: w
      • AT2G46890.1 - [+] show detail - Protein of unknown function (DUF1295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4274-1 - 3-prime edge 
    AACCCAACAT CAACGACTTA TTCGAGAGAA AATGAATCGG AATCTTAGAA 
    ACGCCATTGT CGCATTTCTT GCTCCACTTC CTTCTATCGT ATTCTACCTC 
    ACCTTTCTCA GTAATTACTC TTCATCTTCC GATTCAGAGC TCTCTTCTAT 
    TCAATCATGG TGTTTGAATC ATCCTCTTCT ATTAGCAAAC CTTCTCTTCT 
    TCTTAAACGT CAATGTGCTC TTCTGGGTCA TCGGTTTACT CCAATCTAGC 
    CACTGGGTAC GCATCCATAG TCTCCAAATC TGTTACCCAT TTGTTAAAAT 
    TCGCAATTTT TTAGTTTTTG AAAAAATTCG TTAATTTTGC AGATGATCGA 
    TGTGTATTGG ACAGTGATAC CTGTAATGCT GGTTCATTAC TTCGCTTCGC 
    ATCCATTGTC ACAGTACAAT AAGCTGAGAT CCATGATTGT CATAACTCTG 
    ACATGGATTT GGAGCATTAG GTTGACTCAT AACTACTTCC GGCGGGAAAA 
    TTGGGAATGG GGAGCTAGAG AAGACTGGAG GTTCAACGAC TTACGGAAAC 
    AGTACGGGAA ACACTGGTGG TGGCTCTCCT TCTTCTCTGT CTACGTTTCT 
    CAGCAGGTAC ATGACCACCA ACTGTTCGAT GAATTGCCTC AAAGAGCTCG 
    TTTTTAATCT AAGCTACCAN CCCGGGCCGN NGACCACCGG NCCCNTANA

AT2G46890.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1295)
Computational Description
FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 1895 Blast hits to 1895 proteins in 350 species: Archae - 2; Bacteria - 474; Metazoa - 74; Fungi - 141; Plants - 112; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).
Link
InterPro Scan - TAIR