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15-4281-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22148177 [Map]; Strand: w
      • AT3G59950.1 - [+] show detail - Peptidase family C54 protein
        Distance: -486; Region: promoter
      • AT3G59950.2 - [+] show detail - Peptidase family C54 protein
        Distance: -486; Region: promoter
      • AT3G59950.3 - [+] show detail - Peptidase family C54 protein
        Distance: -520; Region: promoter
      • AT3G59960.1 - [+] show detail - histone-lysine N-methyltransferase ASHH4
        Distance: -157; Region: promoter
    Flanking Genome Sequence: 15-4281-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGC 
    GGCAGTTGCT GTTTTTCCTT TTGAGGATTT TGAAATCCTT CTGCGCAAAA 
    GGCAATAAAT CGGCTTAAAA GGGTAAAAGA GTAATATCGA TTTATTTCCA 
    TTCATCCGTT TAAAGACATA AATGGGCTTC AGATTTTTGG ACTGGCCCAA 
    TACAATCAAA CCCATTTTGT TTTTGGTAAC AAAATAATTA ATTTATTACT 
    AGTCATTTGA ATTTATTCCA GACAGTTATA TCATTCACAA TTGGTAACTA 
    AATAATTACT CCTTTTTACC GTAAAATTGA TATTCTGTAT ATCAAGATAT 
    TCAACGCACA AGGAATTTTT TTGAACAATA TATTCGATTT GCTTTACTTG 
    GTTTAAGTCG CCGGTAAAAT TTATTTGGTT TAAGTCGCCG GTTTAATTTA 
    GTTTAACACT GATACATTTG ACAAATACGA ACTAGTGACA AAATTATACT 
    GCCAATGGAA AAACATATTC GAAGCTAATA TAAAATGTAA TGATCCATAT 
    TCGAAGCTAA TATAAAATGT AATGATCCAT ATTCGAAGCT

AT3G59950.1

Model type
Protein coding
Short Description
Peptidase family C54 protein
Computational Description
Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 844 Blast hits to 806 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 426; Fungi - 182; Plants - 81; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59950.2

Model type
Protein coding
Short Description
Peptidase family C54 protein
Computational Description
Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 737 Blast hits to 737 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 397; Fungi - 164; Plants - 72; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59950.3

Model type
Protein coding
Short Description
Peptidase family C54 protein
Computational Description
Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59960.1

Model type
Protein coding
Short Description
histone-lysine N-methyltransferase ASHH4
Computational Description
histone-lysine N-methyltransferase ASHH4 (ASHH4); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH3 (TAIR:AT2G44150.1); Has 5426 Blast hits to 5341 proteins in 477 species: Archae - 2; Bacteria - 423; Metazoa - 2298; Fungi - 546; Plants - 1031; Viruses - 0; Other Eukaryotes - 1126 (source: NCBI BLink).
Link
InterPro Scan - TAIR