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15-4331-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10640530 [Map]; Strand: w
      • AT5G28635.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-4331-1 - 5-prime edge
    CTTATCGTAT TCCTTCATCG TGTGGTGCGG TTTATTTTTT GACTATTGTT 
    GATGATTTCT CTCGATCAGT ATGGACGTAT CTCATGCTAG CAAAATCTGA
    AGTTCGCACT TGTTCTCACA AACTTTTTTT GCATATACNG GAAAAGCAGT
    TTGGCAAAAG TGTGAAGGTG GTGGTTCGTA GTGATAATGG AACAGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10640414 [Map]; Strand: w
      • AT5G28635.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-4331-1 - 3-prime edge
    ACGATAAGGA CACCATACGT CACAATGGAT GAAAGAAAAA CAATCCAAAG 
    CT

AT5G28635.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.1e-162 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR