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15-4477-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17373898 [Map]; Strand: w
      • AT2G41670.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -185; Region: promoter
    Flanking Genome Sequence: 15-4477-1 - 5-prime edge 
    GCTNGGAATG GGCAAACCNT TGAACCANNC ANNTACTNCA ACCTNNACGA 
    TAACAACGAG CANCGCAGAG TGTCCCAGAG ACCCATCTAT CTCCTACAAA 
    AATTGGTCGT CCAAACTGTT TTGTTACACA AACGTATCTC TATGTAAAAA 
    ATTGTAATAA GCCCAAACTT TAATCATATG AAGCCCATCA AAAGCCCAAA 
    TCCTATAACC AAATTTGGAT TTATTTTGCG TGACGAGCTG TAAAACCTTA 
    GAAAACCCTT CTTTCGCTGT TGTTGCCGGA GAAAATGGTG ATGATGTTGA 
    GGAAGACAGT GAAGAAAGGT TTAATCGGCG GAATGAGCTT CGCTAAAGAC 
    GCCGGAAAAA TCAATTGGTT TCCCGGTCAT ATGGCTGCAG CTACTCGCGC 
    CATTCGTAAC CGCCTCAAGC TCTCCGATCT CGTTATCGAA GTTCGCGATG 
    CTCGTGTCCG TAAACACTCA CTCACACTAT CTCTCTTTGT ATTCGATCCC 
    TTTATCATCG TGGAAGGAAT AATCTGAATT GTCGTTGTCT TTTTTTTGGG 
    TATTTTTGCA GATTCCTCTG TCATCGGCGA ACGAAGATCT ACAATCCCAA 
    ATGTCAGCTA ANAGACGTNT CATTGCTCTG AATAAGAAAG ATTTAGCAAA 
    CCCTAATGTT CTCAATGTAA TTCGTTTTTT TGNGNGAACC TTTGNNTTTC 
    TTTAACCTCT TGGTANCTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17373782 [Map]; Strand: w
      • AT2G41670.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -301; Region: promoter
    Flanking Genome Sequence: 15-4477-1 - 3-prime edge 
    TTCCTAGCTT ATCTCATAGT TGTTTTATTT ATTAGTTCAA CTTTCAACTA 
    ACTAATTAGC ATTTTAATTT TACCTTTTTA AAACTCATTA CCCTTATAAA 
    CTTTTGTAAT TAACTATGTT CCATTTTGGT AAAATAAAAT TACATTTTAT 
    CCCAAACAAA AATTTAGCTT CCGATAACAT TTTAGTTGGA TTTGTTTTTA 
    ACACTACACG TGTCACGTAT GGCCATAATT CAATATTATT TGAAATTCAC 
    TACATATTAA AAACGGTAAG ACCCTGTTTC TGGTAAGAGG GCTAGAACCT 
    TTAGCACACT TATATACATA TGATAGTACG GTTACCACTC TTAATTAGTT 
    GATAATTGAG AAATGATCAA ATATCTGTAA CTACTTAGAA GATATTTATG 
    TTTTTCTGTT AAAGAGATAT TTATGTTGTT CAGCTTAAGC TAATACACGT 
    GTTTGATTAA CATAATTATC ATCGAGTTGT TAATTGGTTG GATGAGCACT 
    TTACGAACAC ACTAGTTGTT TTTTAGAGGG ATATAATTGA TGGTCTGAAG 
    ATTAGCAATA ATTTAGCTTC GAATATTATG ATTTGTTAAA TAACTATNGT 
    ATTATTTAAG GTAGAAAAAG TCACTACCTT TGTCGGCTTA AGATCCAAAA 
    ATAATATCGT GAAAATATCT CATGCNTGGG AAATATCNTT CACGTGGGNC 
    CTTTTCTTTN TGTATACCGG GCAGGGANAA NGNTTTCCTT TNTT

AT2G41670.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
Link
InterPro Scan - TAIR