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15-4547-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654520 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4547-1 - 5-prime edge 
    CGTGTNNGAG ATTGCTTTCA ATCTCCGGAC GGAGCTTCTC TGGGTGATTT 
    GCGGTGGATG CTTCTTTCAA TTGATGAATT GGGTTGTTCG TTCATGGATT 
    TCTCGTGACC CTATATTTGT TAATACCTCT GTCTCGCTTT TGCACTCAAT 
    CATCACCTCC GCATCAGGTC CCTTTCTCTC TTCTCTTATA TTTGAGTCCT 
    TACTATAGGA TTGCGCTCTG TTAGTGGGGA AATTTTATCA TAGGTGTGCA 
    CATTGGTCNT TGGTATTAGN CAATTTTCCT TTGGNGCTGC GNNTTCANNG 
    NNNTCATNGC TTAATGTGAT ACTNATTCNC CGNTTGGNTC ANCCTTANGA 
    TTGATCGNCA NNTGCATNGA NTANAAAGCA GNTNCTTAAT TTCGNTTAAN 
    CCTAACNGAC NANCATTCTC NCATCTTCNA CANCAGCTCC AGCCGCAACG 
    AAAGNNGANT NAACNCTNCT ANCTACANAC ANNGACNNCG CACANGAGGT 
    TNTCNTACCN ACANTGNTCG ANCCNNNTTC GAANTTGNNT GGNNGGNANA 
    TNCNNAANCT GGNNCCTNNC CNGNNNCGTA NCTTNANCAN NNGCAGGCNC 
    CATATCGANC ACNNANACAN NANNNNANAT ACCNNNCGNA ACNGNCATNN 
    CACAACAANA AGCACCTTTN NAATCCNANN TANNNATANC NCGCCCCGNN 
    NTGANCAGNA NNCCNCANCC GANCTNCNNC NNNANNANNN NCCCGCGTNC 
    GTNCACCCGA ATCATCANGN TCNCNAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654404 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4547-1 - 3-prime edge 
    CAAACACGAC GGAGACAAGC CAAAGAAGCA GCGTCGCTAA GAAAAACTGC 
    CCAGCCCCAT TCTTTTTCCC TCCTGAACTC CCAATCCCGT TCCTCGCCAT 
    CGAAACCTCT CTGTCTCTCT CGGAGATTGC TTGAGAATCC GGCAAAGTTA 
    ACCCTAAATT GGATTCTTAG CTCAAACTTC GATATCCATT TCCAATTTTG 
    GCGGAAGAGA CGATACAAAT GCCTTCACGT TATAAGCT

AT1G21790.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR