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15-4574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9815269 [Map]; Strand: w
      • AT1G28120.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubi...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 15-4574-1 - 5-prime edge 
    CACACAATTC AAATCCGATT TGAAACAAAC GACTCAAGAT TCTATCAACT 
    GATCCTCAAT TCAACGATAA TTCAATCTGA ATACTGATAA CGAGTTTGTT 
    GATCAACAAT TCACAAATCT GACAATCAAA CAAATACNGA ATCCAAGAAT 
    CTTAAGATAA GGAGAGAAAC GGGGAAATCG ATGGCGGAGG ATTTACCAGA 
    AACGAAGATC GATTGAAGAA AAGATTGGAT TGTGAATAAT TGAGATCGTT 
    TGCGACCTAA ATTGAAGCAG GTTGGGACTT GGGAACCAAC ACTAAGCAAT 
    GGGGAAGGAG GAAGAGTGAT GATGATGAAA AAGATTTCTC AAATCGGGGA 
    AACCATCAAT TTTGATTGGA GGGGTATAAA TGGTAAGATA CGTTTCGCTT 
    TTTCCCAAAG TACTTAATTT TTTAGATTTT ATTTTTTATT TTTCTCTACA 
    CGAATCAGGA AAAAAGTCGA ATCGTTTTTG GACCATAAAA AGTTAAAATG 
    ACGGTAGAGC TTAAAATGGG CCTAAATATT TTGGCCCAAC AATAATCTGA 
    ACTTTGCTTA GTCACTAGAG TTTTGTTTTC TTTTTCTTTA CAAACTGACC 
    ATAAACAAAG TGAATCAAAA CTACCTAATT TATTAAGATA AACGATTTGT 
    TTGTTTATCA AAACTNCGTA ATTTATCAGG ATTAACA

AT1G28120.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR