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15-4579-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611202 [Map]; Strand: c
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4579-1 - 3-prime edge 
    GAGCAAGGCG GGTGGCCGAG ATGGGTCGAT GACTCGACTC TGTATTTCCA 
    CCGGAAAAGT GACGACGGTT GGATCAGCGT GTACCGAGCG ATTTTACCCA 
    AAACCGGACC TGTTAACACC AAAACGGTTA CGATTCAAAG AGTCACACCA 
    CCGGGTCTTC ACGCTTTCAC ACCCGCCACG TCACCAAACA ATAACAACTT 
    CATCGCGGTG GCTACAAGGA GGCCTGGATC AGAAATCCGC CACGTGGAGC 
    TTTTCGATTT AAAGAAGAAC GAGTTCGTCG AGTTGACTCG TTTAGTCTCG 
    CCGAAGAGTC ATCACTTTAA CCCGTTTCTT TCCCCTGACT CGTCCCGAGT 
    CGGATACCAT AGCTGCAGAG GTGACGCAAC TGGACGTAAA ACTCCTCGGA 
    ATCTCCTCCA AAGCCTCAAA ACAACTTCAA ACGACCTCTC TCTCTTCAGA 
    TTCGACGGTG CGTTCCCGTC TATCTCGCCG GAAGGTGACA GATTCGCGTT 
    CGTCTCTTTC ACAGGCGTTT TCGTGGTGAA CCCAGATGGT TCAGGTCTAC 
    GTCAATTGCT TCCACAAATG GGATTTGGAA CAGTTTGGGA TC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611086 [Map]; Strand: c
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4579-1 - 5-prime edge 
    CCTTGCTCGA CCACCTTGAC TCGCTGAGTT CCATCCTGAG TCAGGAAAAC 
    GTAGACGTCT GAGCTAATCT CTTTCTCCAC CATGCTCCAT GTCCATCCTT 
    TCTCTCCAAA CGAAGCCACG GCAGTCCACT TCCCAGACGG TGACACCGCC 
    GGAGAAAAAT CAGCGATTCC AGGTGGTGTT AACCGACGAG TCGACTTAGT 
    TCGTAACTCC GTCGAGTAAA CAGCGGCCCA ACTCGCCATG GGCTTACCCG 
    GATTCTCATA TGTCGACACG TGGACAAGAT AGCCGTTAGT TAAAACAGGC 
    GTGTCTTTCA TCGAATTTAC ATTCATGCCA CTCTGTTGTT CCTCGCCGGA 
    AAATAACGGA ACCTGAATT

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR