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Mutant Lines
15-4638-1

15-4638-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 8767586 [Map]; Strand: c
  - AT1G24793.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon1 (CDS)
  - AT1G24793.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 1; Position: 8781966 [Map]; Strand: c
  - AT1G24880.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
3. Chromosome: 1; Position: 8804494 [Map]; Strand: c
  - AT1G25054.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G25054.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon3 (CDS)
4. Chromosome: 1; Position: 8818872 [Map]; Strand: c
  - AT1G25145.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon1 (CDS)
5. Chromosome: 1; Position: 8833250 [Map]; Strand: c
  - AT1G25210.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT1G25210.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 15-4638-1 - 3-prime edge
```
TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
AGACTCCCCG TCACCGTCAA AGCCACTAAG CCGTCGTTTC TCGTCATTTG 
GATC
```
5 prime edge [+] show sequence
1. Chromosome: 1; Position: 8767576 [Map]; Strand: c
  - AT1G24793.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G24793.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon1 (5UTR)
2. Chromosome: 1; Position: 8781956 [Map]; Strand: c
  - AT1G24880.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
3. Chromosome: 1; Position: 8804484 [Map]; Strand: c
  - AT1G25054.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G25054.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon3 (5UTR)
4. Chromosome: 1; Position: 8818862 [Map]; Strand: c
  - AT1G25145.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: -5; Region: promoter
5. Chromosome: 1; Position: 8833240 [Map]; Strand: c
  - AT1G25210.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT1G25210.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 15-4638-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TCAACGTCTG ATTAATTTTA ACCATNCCGG 
GCNGTNGNNC ACNCGTAGCC CTATAGGATA TACTAAACCG GAATCAAGAA 
ACAAATAATG TATAGTAAAC CGGAATCAAA ATTCATGTTA TGCAAATATC 
CCAATTGTTC CACCAAAAAC CATTTTCTTT GTGTGATGCT TTTCTCAATT 
TCACATAATC TCCATTTTTG AAGTCTTAAT CTTCTAATTA TCATCAAATC 
TACCTATATA ATTAAAAGGA GAAGTACAAA GTAAAGAATG CCTAAAAAAT 
TTAGAAATAT TACAGCAATT GCCTCTAAAT TATGGCATAA AGAAGCGATT 
AATTGAAATT GAGAAGAAAA CTTATCATAA TTGAAAAATC TGATAGTTGC 
TCCAAGATCC ACACCAAACA CTATGATCAT TCGTCCCTTT TTCTTTTGCC 
TGTGATACCT TGGTAGATTT GAGTCAAACT TGGAACATAA TAAAACATAC 
ATTACAGAGA TGATCCGACT TCAAAACCCA CTTGTTTCAC TTTGTTGTCC 
TCTCCAAAAA TGTGTACCGN GGTTTTTCCT TGGTCTCTAA TATTATCACA 
ACACACGACC ACTCTCTTNT TCTCGTCGAC CAAGAAACTT CCGCTTTCCC 
CAATACAACG TTTAGGCTGC AAATCCAAAG CTAANACCAT GCTCCACGAC 
ACCACTTGNG TCTCACCAAT CTTATTTGTC ACCN
```

AT1G24793.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24793.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G25210.2); Has 5025 Blast hits to 5025 proteins in 1409 species: Archae - 0; Bacteria - 2975; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 1994 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24880.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G25054.1); Has 5321 Blast hits to 5321 proteins in 1417 species: Archae - 0; Bacteria - 2995; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25054.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5320 Blast hits to 5320 proteins in 1417 species: Archae - 0; Bacteria - 2992; Metazoa - 1; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25054.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5321 Blast hits to 5321 proteins in 1417 species: Archae - 0; Bacteria - 2995; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25145.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1).
Link: InterPro Scan - TAIR

AT1G25210.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25210.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24793.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR