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15-4856-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17874301 [Map]; Strand: w
      • AT4G38060.2 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (CDS)
      • AT4G38060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4856-1 - 3-prime edge
    GCCATGGTGG TTATTAGGAA GTAGAAAAGA GAAAGAAACT GAAGCTCTTA 
    AGTTTCCTAC AAAGATAGCT CGAGTAAATA AGAGGAAAGA GCTTGAACTT
    GAGAGCTTTG GTTCGTCTGG CTCTGAATCT GTAGCTTGTT GTTGCTTGGT
    GATGGACCTG AATGGTCTGT TGGATGGACT GAGCCACATG GACCTGATTT
    CCAAAGTGAT GATGAAGGAA ATGATGGTGG CTTCTTAGTG TTGGTTCCTT
    GTTATAGAGC TGTTGTTGAA GGCTCTAGTA ATAATAATAA CCAGCTCTTG
    AGTGCNTGTC AAGAATCTCC CCAATGGTTT GCCTCCTGGT ATGAATCACC
    CCTAATTTGT GGTCTTGGTT TGGTGTAGTG AATTACCATA GCCTTCTCTC
    TTGGGATTGA TGATCTATTG GATATAATGC TTGTGGTTTT GGTTTAGTGA
    ACTACCAAAG TTGCTCTCTT TANAGGTTTC TTTTCACATT TGATCCCATG
    TGCAAATTGT CCACAGTCTT TGCTATTTGA TGTTTCAACA GTTTTTGTCC
    TAAACCAAAG TGAAAACTTT TCTGAATTAC CANCCCNGGC CGTCNACCAC
    NCNTGNCCNN NT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17874417 [Map]; Strand: w
      • AT4G38060.2 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (5UTR)
      • AT4G38060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-4856-1 - 5-prime edge
    ACCATGGCCA ACTTGGGATC GGTCTCTTCA TCATTTCAAG AACCGGATTG 
    ATACTTTTTT CAGAAATTCC ACCATAAAAT CTGGTCAAAG ATCACAGCAA
    CCAACACACA ATTGAAAACC CTTTTGCTTG CAATAAATCA ACCTCTAACG
    ACTCAGAAGA AATCAATGAA CGGTTTAAAG AATAAAAAAA AACAAAATCT
    AAAAAGGACA AAACTTTCAC AGGAAAAAGA TGAAATTTTT TTAACTCTTA
    GCTCAAGATC TAAGCT

AT4G38060.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38060.2

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR