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15-4919-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7880819 [Map]; Strand: c
      • AT1G22300.1 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
      • AT1G22300.3 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
      • AT1G22300.2 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-4919-1 - 5-prime edge 
    CTGTTACTTG ATCTGGACTT TTAGATGCGA CCTTTAAGTA ATTTCTTGTT 
    TAATGTTGTT TAGATACTCT GATCACTCTT GATCTTATCT TGATATAATT 
    TTATACTTAC TGTTGTCGAA TCTCTTAGCA TGAAAATGAA ATAGATCTAC 
    GTTTTTGGAA GCAAATTCAA AGATCGGATT TTTTTTTTTN GNGGGGNANN 
    ANCCAAAANG GGGGGGGGCA ANAAAAAAAG NNNCCNACCT NGNNGGGGNC 
    CNANCNGGGN AAAAANGNAA TNTNGTTTNN GNGGGGNCCA AAAANGNNNT 
    GGGGNCAGGG NNACCNTNNG GGAAAANCCT TTNTNCCTTN GNCCAAANGG 
    AAAANCCCAG GGGAAANGAN NAAANNGNCA ANNGGCTNAA AANTTNNCGA 
    AAAAAANTNN AAAANAACCT NNCNAAAGTT GGAAAGNACN NNTGGCCGGC 
    CNTGGAAAAN CNTNTANTNC CATNGTTAAN CCCNGGGGNG CNANCGGTNT 
    TTTTNNNNAA ANGGGGNGGG NCANNTTTNT NANCCCCGNN CCNTCCNGGG 
    NAANTTGGGG GNACNAAAAA NNAAANCNTT CCCGTTGGNC NAAAGNAAAA 
    NGTTNAACCT TTNNCANAGC NNCCNCCCTG GCTGGGGTNC TCCCCNAAAA 
    NAANANAATN CAGGACCTTT NCCTGGNTCC CNGNTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7880935 [Map]; Strand: c
      • AT1G22300.1 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
      • AT1G22300.3 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
      • AT1G22300.2 - [+] show detail - general regulatory factor 10
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-4919-1 - 3-prime edge 
    AGTAACAGCC CAGAAACATA CAAATCGGTA AAGGGCTACA AAGAAAATCT 
    ATGGAAATGT AAAAACAATT TCGATCGGAG CAATAAAAGA TCGGATTTTT 
    TCAGAAACAT GAACAAATCA TTTTCTGAAT AGAGATCCAG AAATCGGAAA 
    ATACCATCGT ATCTTTCGGT TTGCTCGGAG AGCTTAGCCA AGTAAACCTG 
    CTTTTCCCTC TCATTCTCCA TAGTTTTTTC TTCTTCTTCT TCTTCTTCTT 
    CTTCCTTCTC TGTCTCTCTG AAGTCTGAAT CAAAAATGGA TGCTTTGATT 
    TGATTGATTT CGAGATTAGT AGTAACCCTA GGATC

AT1G22300.1

Model type
Protein coding
Short Description
general regulatory factor 10
Curator Summary
Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1
Computational Description
general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 2709 Blast hits to 2701 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1258; Fungi - 330; Plants - 762; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22300.2

Model type
Protein coding
Short Description
general regulatory factor 10
Curator Summary
Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.
Computational Description
general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.1); Has 2707 Blast hits to 2699 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1258; Fungi - 330; Plants - 762; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22300.3

Model type
Protein coding
Short Description
general regulatory factor 10
Curator Summary
Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.
Computational Description
general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR