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15-5083-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7968704 [Map]; Strand: c
      • AT1G22550.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -63; Region: promoter
    Flanking Genome Sequence: 15-5083-1 - 5-prime edge 
    CAATCACGTC CATTTAAAAT TATGATAGGA GCTGTACAAA TCATAAAAAT 
    AATACAGCTC GTCATAATCA ATCACTCATC TGACTAGACT ATATAAAAAG 
    AATATATACA TATCACAATC TATTTATCGT GTTCATTATT CACGCAGCAA 
    ATATAGCTTT AATATCAAAA CTAAATATAA ATAAATACAT ATAGCTTAAA 
    ATCCAGTTTC CTCCGACAAG AAAATGGCGA TAGCCGAAGA AGAAGCTGCA 
    CTTATAGAAG ATTCCGTCAG CGACTCCGTT GACCACCGNG GACTTCCTGC 
    CGGAAAATCT TCCACCGGCG GATGGAGATC CGCCTGGTAC ATTATAGGTA 
    AAGAACAGTT TTTGTGATTT GTAAATTGTC TCATAAACCA TTATTTTTTA 
    AACAATTTAT TTTATTTTTT TGGTGTGGTT TTTTAGGTGT GGAAGTTGGA 
    GAAAGATTTG CTTACTTTGG GATTGGTTCC AACTTAATTA CTTACCTCAC 
    CGGACCTCTC GGACAATCAA CAGCCACCGC CGCCGTGAAC GTGAACACAT 
    GGTCAGGAAC CGCCTCGATA CTTCCTGTTT TAGGAGCTTT CATTGCANAT 
    GCTTATCTTG GTCGTTACCG NACCATTGNN GNNGCTTCCC TNATNTACNT 
    ACTNGNAATA ACGNNCTNNN NTNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7968800 [Map]; Strand: c
      • AT1G22550.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -159; Region: promoter
    Flanking Genome Sequence: 15-5083-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATAATCT 
    AATATGATTA CATAATCTAA GTTACAACTA ACAACCAATA AACATGCGGT 
    TTCATGTCTA TATATCACTG TTTTCGTTAT TTTATCTTAC AGAAATCAAA 
    AGTCAACTAT TAGGGTTTAT TAGCTACTAA ATTTAAATGA CACNGATCCA 
    TACAAGCTAA TTTTCATCTT TTAAATAAGC TAAAAGTTTT TTTTTTACTA 
    ACNGTTNGTT ATTAATTCTT AGNGNAATAA CCCTTTTTAA ATCGGGTTAA 
    TTCANATAAN GATTTTANAT TATGGANAAC GNGGATAACT AGATTNGGTT 
    CTTANAGAAG CTTTCATGTN GTAGCCAAAG NCCATATGAG TCTTNGGCTT 
    NGGGTCTTTT AACAANAATA CAATTCTTAC NCCTTTAANA TCCGATNGNG 
    GTTTAAGTTC TTAAACTCAA TCNTACNCAT GANATCAAGT CATNTTCGAC 
    TCCAAAACAC TAACCAACCT TNTTNTNGCT TNTCAAAGCT

AT1G22550.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22570.1); Has 7743 Blast hits to 7641 proteins in 1463 species: Archae - 0; Bacteria - 4037; Metazoa - 494; Fungi - 461; Plants - 2187; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink).
Link
InterPro Scan - TAIR