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Mutant Lines
15-5086-1

15-5086-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17975650 [Map]; Strand: c
  - AT4G38380.1 - [+] show detail - MATE efflux family protein
    Distance: -550; Region: promoter
  - AT4G38390.1 - [+] show detail - root hair specific 17
    Distance: -126; Region: promoter
Flanking Genome Sequence: 15-5086-1 - 5-prime edge
```
CTCTCAAATG TAGTTATATT ATTGTTACCT TGCCAAATGT TAATTAGCTG 
TTTAGATTAT TATCATGAAT TGAAATCGAC TTAATTTTGT TTTTTTGAAT 
T
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 17975766 [Map]; Strand: c
- AT4G38380.1 - [+] show detail - MATE efflux family protein
  Distance: -666; Region: promoter
- AT4G38390.1 - [+] show detail - root hair specific 17
  Distance: -10; Region: promoter

TTTGAGAGAG AGAGCAAGAG ATTCGCTGTG GTTTGCTTAT GCATAAGAAT 
AAAGGGAATT AAAAAAACCC AAACTCAGTT TTTTTCTTCT TTTTTAAAAA 
ATTTGTGTGT GTGTTTGTTT GTTTGAGATT AGTTTGGACT TTGGAGTTTT 
GTTCATAGTT TCTGGGCAAC CAACTTCTCC TCTGCCTTAA CGTCATCGAG 
AAATGGCGTC TTCTTCCTCT TCCTCCTCCT CCTTTTGCAC TCTCTCCTTC 
CCATTTCTCT TGTTTTCTTC CTATTCTTTG TAGCCTATCC TCCTTGCTTC 
TTTTGTGTCT GCGTTATACA ACTCATTAAT GGCCTCTTTG AAGTTGAAGA 
AAAGGGATAA TGGCGCTGAA CCTGACAAGA AAAAGCTGGT CATCGCCGGA 
ATT

AT4G38380.1

Model type: Protein coding
Short Description: MATE efflux family protein
Computational Description: MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G38330.1); Has 13476 Blast hits to 13444 proteins in 2154 species: Archae - 331; Bacteria - 10835; Metazoa - 81; Fungi - 150; Plants - 389; Viruses - 0; Other Eukaryotes - 1690 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38390.1

Model type: Protein coding
Short Description: root hair specific 17
Computational Description: root hair specific 17 (RHS17); CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 829 Blast hits to 827 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 829; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR