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15-5276-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2921300 [Map]; Strand: w
      • AT3G09510.1 - [+] show detail - Ribonuclease H-like superfamily protein
        Distance: -504; Region: promoter
    Flanking Genome Sequence: 15-5276-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCAAATCT GATAAAGGAG GGATGGAAAT TTAGTAAAAA
    CGAAAGAGAT TTTGTTTGTG TTTTGTGTTT AGAAATCATA GAAATCTCTC
    GTAGAAACTT ACTAAATTCT TTTAAAAGCA GGCAAGTGTC AAACATCCAT
    AATTTTGTTG ACATGGGTGA CGCGATCCAT ATTGACCTTT TCNTTTAATC
    ATTTTACTTT CCAATTAAAG AATATTATTT TTTGCAAAAC ATATTGTTTG
    AACCATCCAC AAATAACGTA AGATTCAAGG TTTTAGTTTG AGTGTTTGAC
    TTAAAAGATA CCTCAAGGGT CAAGCATACA CTAAGATACA TTCATAGTTG
    TATACGCTTA CGTTTTAAGA GTGAATTTTA ATCATTGACA TAAAACTGTA
    TATTCATAAT TACTAAGATA TTTACGAGAA TTATAACATG ATAACATAGA
    AATGATTTTG NGAATTTANA TTTATTTGTT TATTATAATG AAACAATTTT
    AACCGNGAAT ACGTAAATGA TTTTTTTCTT TCTTTATCGN AAAGTTAATT
    TCTTATTTAC TTTCTAAAAA TAGTCNAAAN CTCGGGATNT GAAACTATAA
    AAGGGGAAAA AAGGNTACNT CNTTTNAAAA AANNNTGCNN AGCCCCCNNC
    NCNTGNGGGC CCNNGAGNNN AACNNNNNNN NNGNNNGNAN GNNNANNNNN
    NNNG

AT3G09510.1

Model type
Protein coding
Short Description
Ribonuclease H-like superfamily protein
Computational Description
Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 1469 Blast hits to 1446 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1468; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR