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15-5305-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8398867 [Map]; Strand: c
      • AT1G23740.1 - [+] show detail - Oxidoreductase, zinc-binding dehydrogenase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-5305-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCTGAAT CACAAGACTC CCTACTCCTC 
    CGGCACCATT AAGAACAAGA ATTGACTTTC CGGCTGAGAA TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8398757 [Map]; Strand: c
      • AT1G23740.1 - [+] show detail - Oxidoreductase, zinc-binding dehydrogenase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-5305-1 - 5-prime edge 
    GTTCCTTGTA ATCTAAGAAT CAGAGATTAA TTGTTGTTGA TTGATTACTC 
    ATATGTGTGT TCGATATAGT TGGCAGAAGC ACGTGTATGG AGCTTCAAAA 
    GTAGCTGCAA CNTGCNGAGT ACAGAAAAGC TAGAGCTAGT GAGAAGCT

AT1G23740.1

Model type
Protein coding
Short Description
Oxidoreductase, zinc-binding dehydrogenase family protein
Computational Description
Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink).
Link
InterPro Scan - TAIR