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15-5422-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8861097 [Map]; Strand: w
      • AT1G25275.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
        Distance: 0; Region: intron2 (CDS)
      • AT1G25275.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
        Distance: 0; Region: intron2 (CDS)
      • AT1G25275.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-5422-1 - 5-prime edge
    CCGACCGGTC TGGGATACNT TTGTCTGATT TGTACCAACC CCTGATTAAC 
    CGGTCTGATT TGTACCGGAA CTAATGTTGA TGTTTTTTGT AAATTACAGA
    TGCTGCCAGG GCAAGTGGGA GTGGTGTTTA AACTTTATAT TTTACCAAGA
    TCCATGCATT TGGATTTAAN GGGGNNGTAA TCTTATTTAA TAATCGTATC
    TCTGGAAAAC ATATTCTGTA ATTTTTATGT AGTTATTGGA ACCAATAAAT
    AATAACAGCT ACAATGGTGG AATTAAGTAC ACTAGTGCTG GTTTGTAATC
    AACTTTAAAA TGTGTTGAGA ACCGGATCAG CTGGTCTAAC TGAAATCTAA
    TTAATCAGTT TGCAACTATA ACTTAAATCT AAAACTAAGA AGTAAGAACC
    GGCTTACTCA CGTCTTGTCT TCTCTTTCGT CGTTAGATCC AAGCTGGGTC
    ATCCAGCTCT ATGGTAACCC AATTAGCAAT ACATACTCAT GGCCCATTCT
    CAAAATTAAT ATATTACTCA GGTCAATAAA GAAGACCAAA CGCATATATA
    GTCTCACTTT AACTTCAATC TCTGAAACTT TTTTTTGTTC ACGTNAAACA
    TATGATCTNT GAAAACCTAA GTNTTTAAAC TGNGTGTATT ACTTAAACAT
    GGCAACATTC CCNAATTTAA AACTGGGNNG NGATCTA

AT1G25275.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 18 Blast hits to 18 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25275.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25275.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR