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15-5474-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7765345 [Map]; Strand: w
      • AT1G22030.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -4789; Region: intergenic
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -2579; Region: intergenic
    Flanking Genome Sequence: 15-5474-1 - 3-prime edge 
    CTCTTAATTG TTTATATGAG AAATTTGGAC CACATAAGAA AAAATAAATT 
    TTCATGTGTA CGAATGTATC ATAACCACAT AGATACATAT CTGTCTCCAT 
    GAAGTATACA AAACTGGCAT TTATCATTTG ATTAATATAG TAGTATATCA 
    TTGGCTACAT CGAAACAGCT ATGAATTTGC TTTCTTTAAC TTTAGTTTCA 
    ACACTTGATG TCCCAAAAAA AAAAAANNAN CNTNTTTTTT NAGTCNAACA 
    TCTTTNTTTN TNANNNGTTA NGGNNTNAAT GGNCCCAAAG GANNTTTTTN 
    TNTNGCNTTN AAAGGATTTN ANGNTTTTAA ANCANNTTTT CNAAAAAAAA 
    AACNCCTTCN TTTTNTTTTT NGTAAAATTN TAANCANCAN GNGTAANCNN 
    AAAAANCCNT TTTACCGNNN CCCCAAATTN GGNTGGAACC TTNNTTCCAA 
    CCCCAANCAA ATACCTAAAA GTNNNATCAA AANGTTTTNT GAAACGTAAT 
    CNCNACCCAN AAGTNTTTTT TTTTCCNCGG GAATGAAAGG TTCCTTAAAG 
    CATATNCCTT CCAAAATTTN GAANGGGGGG NTNCCCCCCT AATAAAATTT 
    TAAAATTTTT TAATTTTCAN AAAGACCCTT TTTAATTGGG GCAAGGGGAA 
    TCCTCTTAGG GTTNCCGGGT TTNGAAACCA ATTTGGNTTT CCNGGATTTT 
    TTTAAANGGG GAAAGGGTTC CTTTCGAAAA AAGGGCCCCN CTA

AT1G22030.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR