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16-0089-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7610472 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0089-1 - 3-prime edge 
    ATCGTCGTGA ATAAGATGGT CGAGCCATTT GAAAGCTGAG GCTTGTTCGA 
    TGAAGCTGAC GATAAAGAGA GGAGACAGAT AAGGAAGAAG AAGAAGAGAG 
    CGTTTGTGAG TTTCATGGTG GACTCTTGTT TTGGGACTTG ACGAATGGCN 
    GTGAGCNGTT TTATAGATGG AACTGATGAC GTGGATGAAT TTGACAAATT 
    TGGTTGACTT TAGTGGTTCT GGATTTTAAC CATTTCGGGA AGCT

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR