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Mutant Lines
16-0152-1

16-0152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 23401824 [Map]; Strand: c
- AT3G63360.1 - [+] show detail - defensin-related
  Distance: -233; Region: promoter
- AT3G63370.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -252; Region: promoter

ATATCAAATT AACAGATCAT ACTGATAAGG ACGTGTGGAC GAACGAATCA 
AAAACGTTAT TCTAAACGCT TAAACCCAAA AACATCAGGA TCATAAGGTT 
GGCAAATATA AATCAGAGAA GATTACCTTT ATTCACAAGT AAGCGGGTTT 
CAAGGAGAAA TTAATTAACG GAGAATAGAG CTGAAGGAGC CGCGGGTGTG 
TCTCCGCACG TCATCTATAT ATAATCATGC GTTCGTTTTT GATTGACATG 
TTCTTCTTTG GTGTAGCACT AAACCTAAAA GTCAACGAAA CATAAGAAAC 
AAAAAAATGA GGAAGACGAT CAGCTTCTCA GCCATAATCC TCGTATTCTT 
ATTGGTTTCC ACAGGTACAT GCATACTCTC AATCAAACTG CAACCCGATC 
TGGAATAACA TCATATATTT TATTGCTGTG TNTACATATA NGATTGATGG 
AGCAAGGAGA CGCNCNAGCC CCNAANNNTG ANTGGGAGTG CNNGNTNNNN 
NNNCNGGCCG NNNNNCACNC NNCCC

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23401940 [Map]; Strand: c
  - AT3G63360.1 - [+] show detail - defensin-related
    Distance: -349; Region: promoter
  - AT3G63370.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -136; Region: promoter
Flanking Genome Sequence: 16-0152-1 - 3-prime edge
```
TTTGATATGC ATATTTACAG AAACGGGCCC TAGTGCTTGT TGTTGAATAT 
GGGCCTGGTC TGGCCCATAT TACTATCTCA GAAGTTAGAT CAGAAGCT
```

AT3G63360.1

Model type: Protein coding
Short Description: defensin-related
Curator Summary: Encodes a defensin-like (DEFL) family protein.
Computational Description: defensin-related; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Knottin (InterPro:IPR003614); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63370.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary: Encodes a chloroplast RNA editing factor.
Computational Description: ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 62; Plants - 47536; Viruses - 0; Other Eukaryotes - 502 (source: NCBI BLink).
Link: InterPro Scan - TAIR