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16-0207-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17182662 [Map]; Strand: w
      • AT1G45545.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0207-1 - 3-prime edge 
    TGTNGNCANN NCTTNNNCCN AATGAAANGG TAGNAGGTAT TTTACCGACC 
    GTTACCGACC GTTTTCATCA TCGAAGATGT AAAGATATTG CCTGGCTCAC 
    CTGGAGGAAT TCAAGATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17182653 [Map]; Strand: w
      • AT1G45545.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0207-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC ATCGTNNCGA GAGTCTAGCG AAAACGAGTC 
    TTGATGGTTT ATCATGACTC TTGGTGCAAT ATACACCTTT GGAGACTCTG 
    GTTCAACAAC AAAATGTGAA TCTTCTTCTT CTTCTTGAAG TCCATCGAAA 
    GAATCAAAAA ACGGATTATG GNCAGGNATA ANANTTGGGG TATCTCCACC 
    GGNTTCCAAG TTTAGGNGAT CACNAATCGA TGAATCGAAT TAACAGCCCG 
    GGNNGGNGAC CACCCCCCGC CCCATANGGN GGNNNNTTTN GGGGGGGGGG 
    NNTGNCCTAN NNCNNGGGNC CCNNAGGGGG GGGGNTTANN TNNCCCCCCC 
    CNCCCCCCNA

AT1G45545.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF827)
Computational Description
Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G42880.1); Has 129275 Blast hits to 70040 proteins in 3406 species: Archae - 1956; Bacteria - 28575; Metazoa - 54363; Fungi - 10498; Plants - 7741; Viruses - 526; Other Eukaryotes - 25616 (source: NCBI BLink).
Link
InterPro Scan - TAIR