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16-0268-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19689271 [Map]; Strand: c
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: -98; Region: promoter
    Flanking Genome Sequence: 16-0268-1 - 5-prime edge 
    CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT CACATTTATG TAAGAATGAA GTAAAAAGGA 
    GAGAAGACTA GAAAAACAAG GAGGAAGTCT TTCCCTTTAA AAAGGGTCAA 
    AGAGGGTTCC TTAAATAAAA GGTTGGTTCC TCGTGAGAGA AAGTCTTTCC 
    CTCTAATTTC TCTAGAGAGA CAGAGAGAGA GAGATAGCTA GAGATGGGTG 
    CNTTCTGCTT CGGTTCCCGA GAGATCCGTC CATCAATTCA CTGTAAAGGT 
    ATTCTCTTTT CGCTCATACT AGAGGAGGAG GTTGCATCGG CGCTGTGATA 
    TTTGTTTATT CCTTATCGTT GTTGTTGCTG TTGTTTCCTG GGAATTAGGA 
    TAGCTCCGGC AAGGACCTGA ATATGAGCAT TTACCAAGGG AAAGTCCTCC 
    TCATCGTCAA TGTTGCTTCC AAATGGTTCG TCTCTTTTGT TCTTTTGCTA 
    TTTTCTTATT CACCTCTAAT CCTTAGTTTT GTGCGCAAAC AGCGGTTTCA 
    CCGAAACAAA CTATACACAG CTCACCGAAC TTTACCGGAA ATACAAGGAC 
    CAAGGTCATT GATTATATTA CGGCCTTTTT TGTTATGCAN NTGCAAGCTC 
    ATCTCCTTTG NTGGNTTTAC CATTTCATGC TCTCTCGTTT TCANATTTTG 
    AGATCACNNN NCNGGGCCGN NNACCACNCN NNCCCNNNNN GGGGGGGGGG 
    GGNNNNNANA CCNNNCNNGG GNG

AT2G48150.1

Model type
Protein coding
Short Description
glutathione peroxidase 4
Curator Summary
Encodes glutathione peroxidase.
Computational Description
glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink).
Link
InterPro Scan - TAIR