1. Home
  2. Mutant Lines
  3. 16-0280-1

16-0280-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2848812 [Map]; Strand: w
      • AT1G08890.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0280-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACATGGATGA CTTACATCTG CAACGGAAAG TCCCAGTTCT TCCATGATTT 
    TGGACTGAGC AGGCGATGAA TATGACATCT TCGAATTATG ATGATAGTGC 
    ACCAAATTAG GCCACAACAA TAGTGATATA ATTTGACATC AACTAAAAAT 
    CACATAATAT TCAAATAACA ATTTTGAGAC AAAACAACTA TTGAACAATT 
    ACCAAAAACA AAAACAGATT TTGATAAAAT TCCAATCTGA GGCATGCTAA 
    TTGAGATCCA CGAGGAACAC TGGAAAATCA AATGAAAGAA AAGGAAAGAG 
    TGATGATGAA ATCTCACAGC GCAGCCATAA ACGAAAGAGC CAGTGACAGC 
    GACGGAGGTA CTAAGAAGAA GACCACAAGT GATGGAAGAA GAGCTTCTTG 
    CTTCTTCTTG ATTATTCACC AGAGGTGTTT TCATACTTCC AGATTCCATC 
    TTCTTTTGTT CCTTCTCCTA ATTGCTTTTC CCTGTATTTC TCTGTTCTTT 
    AATAGTCTTC ACTCTTGAAG CTACCANCCC GGGCCGNCGA CCACNCGTGN 
    NNNNNT

AT1G08890.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08900.2); Has 22268 Blast hits to 21798 proteins in 1696 species: Archae - 379; Bacteria - 7327; Metazoa - 4739; Fungi - 6227; Plants - 2471; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink).
Link
InterPro Scan - TAIR