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16-0331-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4877223 [Map]; Strand: w
      • AT1G14270.1 - [+] show detail - CAAX amino terminal protease family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G14270.2 - [+] show detail - CAAX amino terminal protease family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G14270.3 - [+] show detail - CAAX amino terminal protease family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G14270.4 - [+] show detail - CAAX amino terminal protease family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G14280.1 - [+] show detail - phytochrome kinase substrate 2
        Distance: -404; Region: promoter
    Flanking Genome Sequence: 16-0331-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACATGAACCA 
    ACACGATTAT CAGATTGAGG AAGAGGATAA GATCCGACTA AAACGAGCGG 
    GTAGAAAAAA ACCGTTACTT ACTTAAAATA ACGTTGTTTA AGGCCCATTT 
    ATGTCAGTAT AGGCCCAAAG CCCATTAACG ACCAACGTAA CTCGACGACA 
    AGTCTTTGTC AGTATATCAC AAAATACGTA CATCCCTCGT GTCTTCTAAT 
    TTGTAATTTT GTTCCTTGGG AGAATCATGT CCACTATTTT TCTTTTTTCA 
    TTTTCCTTAT AACCAAGACA AAATATAATT AATATTTTGT TTATACATTA 
    GCACAAAATC ACTGGCAAAT AGGCAGTCTT GTCCCAGTAA TGGAACCCAC 
    ACGACATAGC TTCAAAAAAA AAACANGGAA CTTCCTNATT TNTTCTATTN 
    ATNTTACTCA AATCTAAATC ATCCCTAANA AATAGTANTN CNCAAAANGA 
    ANCAAAANGG NGACCTTAAC TTCNTNTTTT TNAACTCCAA ACGTNTNTTT 
    NGATTTCTNG ANGAACAATA NTANTANCAG TANCAANCNC TANGGGCCTT 
    NCTCTTNTTC TTCTACTTCT TTCTCTTACT TGACAAGCAA GGANNATGCT 
    CTCACCCNAA AAAACCTANT GAGNGGGTTC ACCAATGATG TTCTTGGAAT 
    TAACAAAAAA GCTACNANNC NGGGCCGNNN ACCACCNGNC CCNNNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4864739 [Map]; Strand: c
      • AT1G14240.2 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: -163; Region: promoter
      • AT1G14240.1 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: -266; Region: promoter
      • AT1G14240.3 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: -267; Region: promoter
      • AT1G14240.4 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: -382; Region: promoter
    Flanking Genome Sequence: 16-0331-1 - 3-prime edge 
    CCATTGCTAG TGATTCGTGT ATCCTTGTGT TAGGTTACAC ACGTTTTTTT 
    AACCACTCAA GTCTACGTCA CAAAAAAAAT CAATTTACCA CTAATATTTT 
    ATCTTATCCT CAATTATTGA CCCGTACTAT AATTTATTTT ATAGACTAGA 
    TGTAGAATAT ATTATATAAT AGCCAATAGG GATCGGTGGG AAGAGATTCA 
    TTTCTTTAAG TTATAGGTCT GGAGCGGCCG TTTTGAACTT CTGATTATTA 
    AATCAGATTC TAGACTAATT AAGAAGCAGG CACAAAAAGA AATAGATTAC 
    GTTTCTTATT TTCTTGCGTT GTTTTCACTA CATTTATTGC TATTGCGTTA 
    CGTTTTTTTA AACTACGTTT ATTGCTTAAT GCTAGTATTT GATTATCTTG 
    TTAATATAAT TTTCGTTACG GTTCTTTAGA CGTTAATGCA ACGATCCCAT 
    GCTCCTTCCT GCAGGTTGAA AAATGACACC GGAGACGGAT GCTCTCAAAG 
    TTCAGATCCT ACCTAAGCAC CAGTCATTGC CCTACACAGT CACGAAGGCC 
    AAGTCGAAAT CATTGATCCT GCTAGTTGTC GTTTCCGTGA CTATCACGTT 
    AGGGTTATTA TTATATGTTT TCAACTCAAA TTCTGTTATA TCTTCCGGAA 
    GTTTGCTTAG TCGGAGATGT AAGCTCCGGT ACAGCGTCCT TATCGACGCA 
    GGGAGTTCAG GGACCCGGGT TCATGTGTTC GGGTACTGGT TTGAGTCCGG 
    GAAACCCGTT T

AT1G14240.1

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.2

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.3

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.4

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14270.1

Model type
Protein coding
Short Description
CAAX amino terminal protease family protein
Computational Description
CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 3763 Blast hits to 3760 proteins in 994 species: Archae - 88; Bacteria - 3260; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14270.2

Model type
Protein coding
Short Description
CAAX amino terminal protease family protein
Computational Description
CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14270.3

Model type
Protein coding
Short Description
CAAX amino terminal protease family protein
Computational Description
CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 3768 Blast hits to 3768 proteins in 1001 species: Archae - 88; Bacteria - 3268; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 280 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14270.4

Model type
Protein coding
Short Description
CAAX amino terminal protease family protein
Computational Description
CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14280.1

Model type
Protein coding
Short Description
phytochrome kinase substrate 2
Curator Summary
Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.
Computational Description
phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR