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16-0340-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 280226 [Map]; Strand: c
      • AT5G01740.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -496; Region: promoter
    Flanking Genome Sequence: 16-0340-1 - 5-prime edge 
    GTCATAGTTA GAACCTGAAC CAGACGCATA CACATCTGTT ATTAATAGTT 
    TTGTCTCTAG CGAAAAATCA GAACATGTCT CAATCTTCCC ACTAAATTCG 
    TCCAATTGTT CTGTGAGTGA GCCAGCCAAT AGAAATTGAA CGACCAACGT 
    TTTAGTCGGT TTAGTGATAT AATCTTTTGG TGTTAGAAAA AAAAGATTTT 
    TCATATTATA AAAATATATT AGTACTATAG TAGTGTTATA GTGATGATAT 
    AACCTTTAAA GCAAAAAAAA ANAAANATTT TTCCAAANAA TATANTTGGG 
    NCTNGNTTCT TCTNTGCCTT GGGGGTTTTG ATTGGGAAAA CTGAAAANTC 
    NNATTTTNAG GGGNTTTNCT NAACTTTNNA AAANNANNTA AGNTTNNANN 
    CCGGGGNNNN AANCNNNCNN NCCCCNNNGG GG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 280342 [Map]; Strand: c
      • AT5G01740.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -380; Region: promoter
    Flanking Genome Sequence: 16-0340-1 - 3-prime edge 
    ACTATGACCT ATCTTAAGCA TTCTTGCAGT TACTAGCTTG CTCGGATCA

AT5G01740.1

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: senescence associated gene 20 (TAIR:AT3G10985.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR