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16-0404-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5656405 [Map]; Strand: w
      • AT5G17210.1 - [+] show detail - Protein of unknown function (DUF1218)
        Distance: 0; Region: exon1 (5UTR)
      • AT5G17210.2 - [+] show detail - Protein of unknown function (DUF1218)
        Distance: -28; Region: promoter
    Flanking Genome Sequence: 16-0404-1 - 5-prime edge 
    CGCGTGGATC TATGTAATAA GGAGGAGAGA GTAGAGTACT TTGCCGACTA 
    AAAGTGAGTG CGGTGTTTAA TGGGTTTGTC ACCAACTTTC CATTTTCTTA 
    CCAACGAAGA AGAAGCAGAA AAAAAGTAAA CAAAGACTAA AAAAAAAAAN 
    CCANCNTTTT CGGANTTGGG GGGANAAANA CAAAANTGGA AAGGAAAAAA 
    ATTGNNATGN GGGGGGTTTN ATTCCTTTTG GGTTTATNNT NANCCNGTTA 
    CNGCCTTCNC NCCTTNAANN TCCTCAAATN ANGGGTTNTT NTTAAGCNTT 
    TTTNNGGGTT TCNGTTTTTN ANNNAAATTN GGGGTTTTNT TCANNANNTT 
    GGGGTNATTN CNGCCCCAGN GGTNNGTNGA ANCCCNTNTT NAANGGATTT 
    TNGGGTTTNG GTNGNCTCTC TNTTTATGTG NCCNATTCCN AAAATNCNTN 
    GGCTGNAAAA ANCNTTNNNA ANAAANGNNT ATAANCCGGG NTCNGNNACC 
    NNCCCTNGCC TATNTTGNAT ATGGGNATAT AGCNCNCNNN CCCTNANATC 
    NCGNAGNCTC NTNTNCCCNT CCNNCCNNNN NNANNCTNCA NCGNNNNTCT 
    NNNNATGNNT ANNTNNTNGN TNTNGCNNNT ANTNCGCGTG NGACAGNCAG 
    TAAATTTNNN NCATGTNGNN TCANNNGANG NANNNTGCNT CGNAATNNGC 
    GNTGGCAACN TTTGGAATNT GANNAANATN NTANNTATNN NNTNTATAGN 
    NCNNNCANCN NNNNCNTCCN NNNGNNACCN NNCNCCNT

AT5G17210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1218)
Computational Description
Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G17210.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF1218)
Computational Description
Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR