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16-0458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2021266 [Map]; Strand: w
      • AT3G06520.1 - [+] show detail - agenet domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-0458-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACAT AGCACACAAC 
    AGGCGAGAGT TCTGAAGGAG GAACTGGTCT TATGTCCTTG GCTTCTACCA 
    CATCTCTCAG AGGGATCGAC TCACCATCAT CTCTACTAAA TTTCAAGTGT 
    TCAACAATGT ACTTATCATC ACCTAATAAA CAAAGTATAC NGAGCACAAT 
    ACCAAGAACC CTTGTAAGCT

AT3G06520.1

Model type
Protein coding
Short Description
agenet domain-containing protein
Computational Description
agenet domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 523 Blast hits to 271 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 518; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR