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16-0548-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 216150 [Map]; Strand: c
      • AT4G00467.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: -74; Region: promoter
    Flanking Genome Sequence: 16-0548-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    AACACAACCT TTTACTCTAT AAATTCAACT TAAATTTTTT TTAATGATTA 
    AGAAAACTTG TGTGTGTGAT TCCATGAGCA TCAATGAGAA ATACTTCCAA 
    TATCCCTCTC TTCATATGTG ACATCCAAGA AAATCAAATA CTCAAAAGAC 
    TTTAAGAAAC TAAGAAGTAG TGTGTGGTAA TTAGCGTGAA GGCTGCATCA 
    ATTGGAGATA TATAATGAAT GTGAAACAAT CAAATTTTAT AATGTACCAT 
    AACATTTACT ACTTCTTTGG AGGCTCTATG AGTTACAAGA GAACACCATA 
    AATTATGTTA TGCATTCAAG AAAGAATCAA ACGGGTTTAT TACGGCCAAA 
    AGCCCACTAA ACCTAAAAGC CTACGAGGAC CAAATCAATA ACTTGAGGTT 
    TAAGGTACAA CTTATTATGA TAATGTCGGC AGAAAATTNG ATTAGTAACT 
    TTAACAAATC CCACATCGGA AACATATGGA AATTTTAGCT CGTATATAAG 
    ACAGATTAGT TCAAGCATTA GTAACCAATT GGCTTTGAGG TGGATAAAAC 
    TCATTAGCTT TCCCATGAGA TCATAATCCT TGACCCAATA GGGTTCATTC 
    AAATTACAAT AGGATATGTA TATGATCCAT CCTCTTCACG GGAAAGAAGT 
    TGAGCCAAAG CCAATTGGTT ATTTTTTTCT ATATATAATA GCTCAAAACA 
    ATCATTAGTG ACAGATACAA ATCGCCCATG AN

AT4G00467.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR