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16-0718-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15987040 [Map]; Strand: c
      • AT3G44310.1 - [+] show detail - nitrilase 1
        Distance: 0; Region: intron1 (CDS)
      • AT3G44310.3 - [+] show detail - nitrilase 1
        Distance: 0; Region: intron1 (CDS)
      • AT3G44310.2 - [+] show detail - nitrilase 1
        Distance: -34; Region: promoter
    Flanking Genome Sequence: 16-0718-1 - 3-prime edge
    CGTNGCTGGN CNGNNTGCAC CCAAGGCCNA NTAANGCTCN AGTCCAATAA 
    CTANCAGACT AGGAANNATA TACTTGAGGG ATATGATGNG GCCNANCTAT
    ATGGGNCACC CATCATNTNN ATCANTAATC AATGCCAGNA TGAGNCCCNN
    ACAATNACAT ANCCNANCGT NNGAGCTGAC TAGGATGAGC CATGAATGGT
    GANCGAAACT GAACAGATCT NANNGNATNA TGATAGCAAC GAAAAATATA
    TATATCTATA GAGTATGTGC TATNTGGATT GTGNNTATCC AGAACCCNAA
    CAACNCTCNA ATTTTACATA TCCTACTTCC ATTATNCNCA NANTNTNTNN
    TNATNNNTTT ATNNNNACTT GNATCNATAA NNNGACCGGN NNTACATANC
    NTAACCAGCT CANTGACTTT GAACAATATC CTCAATTATT GCATGCTTAT
    CCTAGGCCGA GTGTATTCAA AGTATACACC ACCGATCTCG GATC

AT3G44310.1

Model type
Protein coding
Short Description
nitrilase 1
Curator Summary
Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.
Computational Description
nitrilase 1 (NIT1); FUNCTIONS IN: indole-3-acetonitrile nitrilase activity, nitrilase activity, indole-3-acetonitrile nitrile hydratase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 2 (TAIR:AT3G44300.1); Has 7572 Blast hits to 7496 proteins in 1731 species: Archae - 139; Bacteria - 4902; Metazoa - 443; Fungi - 562; Plants - 319; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44310.2

Model type
Protein coding
Short Description
nitrilase 1
Curator Summary
Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.
Computational Description
nitrilase 1 (NIT1); FUNCTIONS IN: indole-3-acetonitrile nitrilase activity, nitrilase activity, indole-3-acetonitrile nitrile hydratase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 2 (TAIR:AT3G44300.1); Has 4645 Blast hits to 4615 proteins in 1269 species: Archae - 39; Bacteria - 2832; Metazoa - 304; Fungi - 427; Plants - 285; Viruses - 0; Other Eukaryotes - 758 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44310.3

Model type
Protein coding
Short Description
nitrilase 1
Curator Summary
Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.
Computational Description
nitrilase 1 (NIT1); FUNCTIONS IN: indole-3-acetonitrile nitrilase activity, nitrilase activity, indole-3-acetonitrile nitrile hydratase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 2 (TAIR:AT3G44300.1); Has 7572 Blast hits to 7496 proteins in 1731 species: Archae - 139; Bacteria - 4902; Metazoa - 443; Fungi - 562; Plants - 319; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink).
Link
InterPro Scan - TAIR